RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 NDUFS3O75489 264 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 HLA-DRAP01903 254 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ICAM1P05362 532 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 RB1P06400 928 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PAICSP22234 425 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GPC1P35052 558 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CNTNAP1P78357 1384 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PPATQ06203 517 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CAMK2GQ13555 558 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GAS6Q14393 721 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZFP69Q49AA0 526 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 FAM220AQ7Z4H9 259 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 C11orf74Q86VG3 221 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SUN5Q8TC36 379 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CENPIQ92674 756 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GAD1Q99259 594 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 HNRNPABQ99729 332 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 IDI2Q9BXS1 227 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SH3BP1Q9Y3L3 701 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 hCG_2014768A0A024R1R8 64 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 WRBO00258 174 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PRRG1O14668 218 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZBTB39O15060 712 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 RRM1P23921 792 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PTPN5P54829 565 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 UBXN2AP68543 259 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SEMA3AQ14563 771 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 BRMS1LQ5PSV4 323 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF605Q86T29 641 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 RFKQ969G6 155 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MFSD14AQ96MC6 490 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SLITRK1Q96PX8 696 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 C19orf43Q9BQ61 176 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 THAP2Q9H0W7 228 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 REEP1Q9H902 201 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZIM2Q9NZV7 527 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 VPS51Q9UID3 782 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 DNAJC16Q9Y2G8 782 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ARL5AQ9Y689 179 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ILVBLA1L0T0 632 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 AGPSO00116 658 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PAPSS2O95340 614 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CCNIQ14094 377 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TMEM132BQ14DG7 1078 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PLA2G4EQ3MJ16 856 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 C1orf189Q5VU69 101 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TLDC1Q6P9B6 456 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MTSS1LQ765P7 747 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ASRGL1Q7L266 308 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CENPLQ8N0S6 344 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 NPLOC4Q8TAT6 608 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MCOLN3Q8TDD5 553 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 C1orf54Q8WWF1 131 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 WNK4Q96J92 1243 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MUC3BQ9H195 1237 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF358Q9NW07 568 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GABBR1Q9UBS5 961 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TRAF6Q9Y4K3 522 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 UNCXA6NJT0 531 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 BPNT1O95861 308 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 KITP10721 976 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CASP7P55210 303 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PAGE2BQ5JRK9 111 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 FAM228AQ86W67 206 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 KIAA0895Q8NCT3 520 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 OR5T2Q8NGG2 359 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GIPC3Q8TF64 312 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 HTR3CQ8WXA8 447 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SGCDQ92629 289 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TIFAQ96CG3 184 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 RADILQ96JH8 1075 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 FEM1CQ96JP0 617 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 CAMK1GQ96NX5 476 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 C1QTNF1Q9BXJ1 281 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PRRG4Q9BZD6 226 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 POLR3FQ9H1D9 316 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 VTA1Q9NP79 307 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 AAASQ9NRG9 546 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 RASSF1Q9NS23 344 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 A0A1B0GVI7 797 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 HTR3EA5X5Y0 456 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 SLC33A1O00400 549 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF208O43345 1280 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 HLA-DQA2P01906 255 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 FGF1P05230 155 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 LTA4HP09960 611 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 FCER1AP12319 257 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GSTM3P21266 225 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 BAG6P46379 1132 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MRPS10P82664 201 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 PRKCEQ02156 737 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GSTM4Q03013 218 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TWF1Q12792 350 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MAMLD1Q13495 774 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 BTG3Q14201 252 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 FASTKQ14296 549 aaKnown RBP5.26□□□□□ -1.57
SCN1A-201ENST00000303395 TMEM132DQ14C87 1099 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 GNASQ5JWF2 1037 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 MFSD14CQ5VZR4 134 aa5.26□□□□□ -1.57
SCN1A-201ENST00000303395 ZNF773Q6PK81 442 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms