RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ANKRD66B4E2M5 251 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 KLF11O14901 512 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CD3EAPO15446 510 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 APOA4P06727 396 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 GLRBP48167 497 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CBX2Q14781 532 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 TAF1AQ15573 450 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC5A9Q2M3M2 681 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 NCEH1Q6PIU2 408 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CILP2Q8IUL8 1156 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 TNS4Q8IZW8 715 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 PLD6Q8N2A8 252 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 GBP7Q8N8V2 638 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 OR4L1Q8NH43 312 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 RPL10LQ96L21 214 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 TRIB3Q96RU7 358 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 KDM4CQ9H3R0 1056 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ABCF3Q9NUQ8 709 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 SIRPGQ9P1W8 387 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 LHX3Q9UBR4 397 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 ZMYM5Q9UJ78 669 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 OR51B4Q9Y5P0 310 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 CEP290O15078 2479 aa14.57□□□□□ -0.08
SHCBP1-201ENST00000303383 MYO9BQ13459 2157 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 PFDN6O15212 129 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 SIN3BO75182 1162 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 DCTN3O75935 186 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 PROCP04070 461 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 KITP10721 976 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 LPOP22079 712 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC8A1P32418 973 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 TRAF2Q12933 501 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 DBN1Q16643 649 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 TMEM25Q86YD3 366 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 GPR63Q9BZJ6 419 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 COPG2Q9UBF2 871 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 CLEC4EQ9ULY5 219 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 CRYL1Q9Y2S2 319 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 UBA6A0AVT1 1052 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 MAGEA12P43365 314 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 MAPK8P45983 427 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 ARFIP2P53365 341 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 CAMK1Q14012 370 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 RALGPS1Q5JS13 557 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 RNF43Q68DV7 783 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 C10orf107Q8IVU9 208 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 ARID3BQ8IVW6 561 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 ZNF557Q8N988 423 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 HACD3Q9P035 362 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 MYLKQ15746 1914 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 DENND4CQ5VZ89 1909 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 CCDC162PA2VCL2 907 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 GFRA2O00451 464 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 CD160O95971 181 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 MYL2P10916 166 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 RALBP11234 206 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 LIG3P49916 1009 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 CORO7P57737 925 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 MSLNQ13421 630 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 ZNF460Q14592 562 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 PITRM1Q5JRX3 1037 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 KCTD4Q8WVF5 259 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 ALG14Q96F25 216 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 MYO19Q96H55 970 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 LRRC37BQ96QE4 947 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 TNKS2Q9H2K2 1166 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 ACTR5Q9H9F9 607 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 THAP1Q9NVV9 213 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 EMCNQ9ULC0 261 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 PKP3Q9Y446 797 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 SPO11Q9Y5K1 396 aa14.56□□□□□ -0.08
SHCBP1-201ENST00000303383 LEPRP48357 1165 aaKnown RBP14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 TAS2R39P59534 338 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 KLC3Q6P597 504 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 TMC5Q6UXY8 1006 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 CCT6BQ92526 530 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 IRF7Q92985 503 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 CDKN2AIPNLQ96HQ2 116 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 MARCOQ9UEW3 520 aaPredicted RBP14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 SLC9A3R1O14745 358 aaPredicted RBP14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 AURKAO14965 403 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 SMAD6O43541 496 aaKnown RBP14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 SNRPD1P62314 119 aaKnown RBP14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 ITGA9Q13797 1035 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 SHHQ15465 462 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 AFTPHQ6ULP2 937 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 CAMK1DQ8IU85 385 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 RMDN2Q96LZ7 410 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 ATP13A3Q9H7F0 1226 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 GPAMQ9HCL2 828 aa14.55□□□□□ -0.08
SHCBP1-201ENST00000303383 A0A087X1B8 175 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 NDUFS3O75489 264 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 SERPINE1P05121 402 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 COL6A2P12110 1019 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 CTPS1P17812 591 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 GRK2P25098 689 aa14.54□□□□□ -0.08
SHCBP1-201ENST00000303383 PGGT1BP53609 377 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms