RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CTC1Q2NKJ3 1217 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 PRSS36Q5K4E3 855 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 ATXN7L2Q5T6C5 722 aaPredicted RBP21.46■■□□□ 1.03
SOX17-201ENST00000297316 CLNKQ7Z7G1 428 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 TMEM25Q86YD3 366 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 PPP1R14CQ8TAE6 165 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 SKA1Q96BD8 255 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 LINC00597Q9H2U6 94 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 LHX3Q9UBR4 397 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 ZNF510Q9Y2H8 683 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 ARL5AQ9Y689 179 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 CHUKO15111 745 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 CEBPBP17676 345 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 ERVK-21P61565 698 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 DBN1Q16643 649 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 MPPE1Q53F39 396 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 NEPROQ6NW34 567 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 RAPH1Q70E73 1250 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 PARP9Q8IXQ6 854 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 TMEM237Q96Q45 408 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 TDP1Q9NUW8 608 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 THAP1Q9NVV9 213 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 HAO1Q9UJM8 370 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 FBXO5Q9UKT4 447 aa21.46■■□□□ 1.03
SOX17-201ENST00000297316 INTS6Q9UL03 887 aaKnown RBP21.46■■□□□ 1.03
SOX17-201ENST00000297316 FAM95CA0A1B0GW59 222 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 MROH6A6NGR9 719 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 G3V2L1 256 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 LDB2O43679 373 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 PRLP01236 227 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 CPA3P15088 417 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 PAMP19021 973 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 CNSTQ6PJW8 725 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 TTC7BQ86TV6 843 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 ALYREFQ86V81 257 aaKnown RBP21.45■■□□□ 1.02
SOX17-201ENST00000297316 KLHL29Q96CT2 875 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 XIRP2A4UGR9 3374 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 C2orf16Q68DN1 1984 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 OR51F1A6NGY5 319 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 DNAJC6O75061 913 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 XYLBO75191 536 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 HOXA9P31269 272 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 ITGA9Q13797 1035 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 CCDC153Q494R4 210 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 ARHGAP15Q53QZ3 475 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 CRLF3Q8IUI8 442 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 OR6K2Q8NGY2 324 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 ITFG1Q8TB96 612 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 SORT1Q99523 831 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 TM6SF2Q9BZW4 377 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 CPSF2Q9P2I0 782 aaKnown RBP21.45■■□□□ 1.02
SOX17-201ENST00000297316 SPO11Q9Y5K1 396 aa21.45■■□□□ 1.02
SOX17-201ENST00000297316 A0A0U1RQS6 177 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 HNRNPA1P09651 372 aaKnown RBP eCLIP21.44■■□□□ 1.02
SOX17-201ENST00000297316 SBK3P0C264 359 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 NQO1P15559 274 aaKnown RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 HLA-DPA1P20036 260 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 SLC1A6P48664 564 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 RBM20Q5T481 1227 aaKnown RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 TMC5Q6UXY8 1006 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 CENPLQ8N0S6 344 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 TMEM151AQ8N4L1 468 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 DCAF4L2Q8NA75 395 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 OR6Y1Q8NGX8 325 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 GDPD5Q8WTR4 605 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 PDCD6IPQ8WUM4 868 aaKnown RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 KCTD4Q8WVF5 259 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 NUDCD1Q96RS6 583 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 SUDS3Q9H7L9 328 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 NMRAL1Q9HBL8 299 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 NDST3O95803 873 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 SERPINE1P05121 402 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 FGF1P05230 155 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 RHOAP61586 193 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 ELF3P78545 371 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 UGP2Q16851 508 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 ASTLQ6HA08 431 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 NAPRTQ6XQN6 538 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 CCDC91Q7Z6B0 441 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 LDB1Q86U70 411 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 ST13P5Q8NFI4 369 aaPredicted RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 MOCOSQ96EN8 888 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 FAM167BQ9BTA0 163 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 TDRD1Q9BXT4 1180 aaKnown RBP21.44■■□□□ 1.02
SOX17-201ENST00000297316 PBX4Q9BYU1 374 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 ARHGEF3Q9NR81 526 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 DNAJC16Q9Y2G8 782 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 RAI2Q9Y5P3 530 aa21.44■■□□□ 1.02
SOX17-201ENST00000297316 TK2O00142 265 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 EPOP01588 193 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 RALBP11234 206 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 PFKLP17858 780 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 SKIV2L2P42285 1042 aaKnown RBP21.43■■□□□ 1.02
SOX17-201ENST00000297316 CTSOP43234 321 aaPredicted RBP21.43■■□□□ 1.02
SOX17-201ENST00000297316 GLRBP48167 497 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 CD151P48509 253 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 AQP5P55064 265 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 TAS2R39P59534 338 aa21.43■■□□□ 1.02
SOX17-201ENST00000297316 TRAF2Q12933 501 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms