RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ALADP13716 330 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 PSMA3P25788 255 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 GRIA4P48058 902 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 GRSF1Q12849 480 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 B4GALNT4Q76KP1 1039 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 TTC8Q8TAM2 541 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 SERPINB12Q96P63 405 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 MYOCQ99972 504 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 NAT9Q9BTE0 207 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 FCF1Q9Y324 198 aaKnown RBP8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 PPIL1Q9Y3C6 166 aa8.49□□□□□ -1.05
PTPDC1-201ENST00000288976 PHBP35232 272 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CTSOP43234 321 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 GALK1P51570 392 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 OCRLQ01968 901 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ILF2Q12905 390 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 LRRC32Q14392 662 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 MLF2Q15773 248 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 MYLK3Q32MK0 819 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 DGKKQ5KSL6 1271 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ANKRD22Q5VYY1 191 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 PRUNE1Q86TP1 453 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 PDIK1LQ8N165 341 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 NAT16Q8N8M0 369 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 FBXO25Q8TCJ0 367 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ECHDC3Q96DC8 303 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 SEMA3CQ99985 751 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 NEUROG2Q9H2A3 272 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ESYT3A0FGR9 886 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 TRAFD1O14545 582 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CD86P42081 329 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 MAPK9P45984 424 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 DSC2Q02487 901 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ZKSCAN8Q15776 578 aaPredicted RBP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 HNRNPA1L2Q32P51 320 aaKnown RBP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ARMC6Q6NXE6 501 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CCDC121Q6ZUS5 278 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CEP68Q76N32 757 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 NLRP9Q7RTR0 991 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 TMC3Q7Z5M5 1100 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 LRRN4Q8WUT4 740 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 SHDQ96IW2 340 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 RBM15Q96T37 977 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ADGRE3Q9BY15 652 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 IL22Q9GZX6 179 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 TBC1D3BA6NDS4 549 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 PRRT4C9JH25 899 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 K7EQS6 105 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 SERPINA4P29622 427 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ATP5DP30049 168 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 HADHAP40939 763 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CCDC38Q502W7 563 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 RANBP10Q6VN20 620 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 STMN2Q93045 179 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 OSBPL6Q9BZF3 934 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 PPCSQ9HAB8 311 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 IL36AQ9UHA7 158 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 SCN8AQ9UQD0 1980 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 CKAP5Q14008 2032 aa8.48□□□□□ -1.05
PTPDC1-201ENST00000288976 F8W8V4 182 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 APRTP07741 180 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ATXN1LP0C7T5 689 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 KIR2DL1P43626 348 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 STARD6P59095 220 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CDK18Q07002 472 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 STARD3Q14849 445 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 DLG2Q15700 870 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CEP85LQ5SZL2 805 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 STEAP4Q687X5 459 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FSTL4Q6MZW2 842 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 LINGO4Q6UY18 593 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CYS1Q717R9 158 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 DSG4Q86SJ6 1040 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CAND1Q86VP6 1230 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 TSEN2Q8NCE0 465 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 LYSMD1Q96S90 227 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CEP41Q9BYV8 373 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 NOD2Q9HC29 1040 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ANKRD36A6QL64 1941 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ANKRD12Q6UB98 2062 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ATP8B1O43520 1251 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PAPSS2O95340 614 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 TTC4O95801 387 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 NDST3O95803 873 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PRNPP04156 253 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PGAM1P18669 254 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 MAGEA9P43362 315 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 NRLP54845 237 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 WNT3AP56704 352 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SESN2P58004 480 aaPredicted RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 FNDC3BQ53EP0 1204 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 SLC44A4Q53GD3 710 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 BRAT1Q6PJG6 821 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF687Q8N1G0 1237 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 CCNYL1Q8N7R7 359 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 HEPHQ9BQS7 1158 aa8.47□□□□□ -1.05
PTPDC1-201ENST00000288976 TRABDQ9H4I3 376 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms