RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ZCWPW2A0A1B0GU75 182 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 SDHDO14521 159 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 EI24O14681 340 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 IPO13O94829 963 aaKnown RBP13.46□□□□□ -0.26
SCAF4-201ENST00000286835 GNAO1P09471 354 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 SLC35E2BP0CK96 405 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 MAGEA6P43360 314 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 EIF2B2P49770 351 aaKnown RBP13.46□□□□□ -0.26
SCAF4-201ENST00000286835 FLT3LGP49771 235 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 THEM5Q8N1Q8 247 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 MIER2Q8N344 545 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 RIN3Q8TB24 985 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 GAB3Q8WWW8 586 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 KHSRPQ92945 711 aaKnown RBP eCLIP13.46□□□□□ -0.269e-8■■■■□ 23.9
SCAF4-201ENST00000286835 SLC45A3Q96JT2 553 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 C9orf16Q9BUW7 83 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 DUSP16Q9BY84 665 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 RGS18Q9NS28 235 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 TIMM22Q9Y584 194 aa13.46□□□□□ -0.26
SCAF4-201ENST00000286835 IGKV6D-21A0A0A0MT36 114 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 TTC24A2A3L6 582 aaPredicted RBP13.45□□□□□ -0.26
SCAF4-201ENST00000286835 H3BMM5 538 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 PLOD2O00469 737 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF195O14628 629 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SNX2O60749 519 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SIX3O95343 332 aaPredicted RBP13.45□□□□□ -0.26
SCAF4-201ENST00000286835 PROZP22891 400 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 GRM5P41594 1212 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 OR1G1P47890 313 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 PRKCQQ04759 706 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 FAM110CQ1W6H9 321 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 ARHGAP36Q6ZRI8 547 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 CCDC126Q96EE4 140 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 HBEGFQ99075 208 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 TRNAU1APQ9NX07 287 aaKnown RBP13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SLX4Q8IY92 1834 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 TCAF2A6NFQ2 919 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 AP3B1O00203 1094 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 PSMD3O43242 534 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 MAN1A2O60476 641 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 DAB1O75553 588 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 LDLRP01130 860 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 BDNFP23560 247 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 GNA12Q03113 381 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 IMPG1Q17R60 797 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 OGFOD2Q6N063 350 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 CALML6Q8TD86 181 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 KLHL5Q96PQ7 755 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 GPR22Q99680 433 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 MLPHQ9BV36 600 aaPredicted RBP13.45□□□□□ -0.26
SCAF4-201ENST00000286835 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF229Q9UJW7 825 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SMIM28A0A1B0GU29 152 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 OR51F1A6NGY5 319 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SOCS2O14508 198 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 AURKAO14965 403 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 FKBP1BP68106 108 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 GLB1LQ6UWU2 654 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 NPWQ8N729 165 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 RHOBTB2Q9BYZ6 727 aa13.45□□□□□ -0.26
SCAF4-201ENST00000286835 SENP6Q9GZR1 1112 aaPredicted RBP13.45□□□□□ -0.26
SCAF4-201ENST00000286835 EVPLQ92817 2033 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 ELNP15502 786 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 SLC7A1P30825 629 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 CDK9P50750 372 aaKnown RBP13.44□□□□□ -0.26
SCAF4-201ENST00000286835 PPP1R8Q12972 351 aaKnown RBP13.44□□□□□ -0.26
SCAF4-201ENST00000286835 RMDN1Q96DB5 314 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 TRIP11Q15643 1979 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 MSI1O43347 362 aaKnown RBP13.44□□□□□ -0.26
SCAF4-201ENST00000286835 GRIK1P39086 918 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 PSEN2P49810 448 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 DEFB115Q30KQ5 88 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 SGO1Q5FBB7 561 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 TMEM214Q6NUQ4 689 aaKnown RBP13.44□□□□□ -0.26
SCAF4-201ENST00000286835 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 TMEM135Q86UB9 458 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 RALGPS2Q86X27 583 aaPredicted RBP13.44□□□□□ -0.26
SCAF4-201ENST00000286835 CROCCP3Q8IVE0 287 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 STYXQ8WUJ0 223 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 HDAC10Q969S8 669 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 ESAMQ96AP7 390 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 TEKT5Q96M29 485 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 SPON2Q9BUD6 331 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 CEPT1Q9Y6K0 416 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 RHOBTB1O94844 696 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 KCNH1O95259 989 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 TIGD2Q4W5G0 525 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 NOL9Q5SY16 702 aaKnown RBP13.44□□□□□ -0.26
SCAF4-201ENST00000286835 KCTD8Q6ZWB6 473 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 SOCS4Q8WXH5 440 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 NCSTNQ92542 709 aa13.44□□□□□ -0.26
SCAF4-201ENST00000286835 C19orf60Q96EN9 201 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms