RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SAC3D1A6NKF1 404 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 GALK1P51570 392 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 AFF1P51825 1210 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 NME5P56597 212 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 MAP7D1Q3KQU3 841 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 C8orf82Q6P1X6 216 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 RANBP10Q6VN20 620 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 FAM47BQ8NA70 645 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 LRCH3Q96II8 777 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 C3orf30Q96M34 536 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 ANKRD60Q9BZ19 345 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 ALG9Q9H6U8 611 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 MTF2Q9Y483 593 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 PTCH2Q9Y6C5 1203 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 PFDN1O60925 122 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 STAMBPO95630 424 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 F2P00734 622 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 RBP1P09455 135 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 CLCNKBP51801 687 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 EMP3P54852 163 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 PRKCQQ04759 706 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 NHSL2Q5HYW2 709 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 KIAA0408Q6ZU52 694 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 ZNF467Q7Z7K2 595 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 ERI1Q8IV48 349 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 ANKFN1Q8N957 763 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 C3orf58Q8NDZ4 430 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 OR2T34Q8NGX1 318 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 OR2T3Q8NH03 318 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 MYLPFQ96A32 169 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 MAML3Q96JK9 1138 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 RHBDL2Q9NX52 303 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 LMCD1Q9NZU5 365 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 SFMBT1Q9UHJ3 866 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 NR5A2O00482 541 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 SUPT7LO94864 414 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 ALDOCP09972 364 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 FAM163BP0C2L3 166 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 HSPA8P11142 646 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 CLCN5P51795 746 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 ADARP55265 1226 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 WNT3AP56704 352 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 PLOD1Q02809 727 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 HECTD2Q5U5R9 776 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 IL31Q6EBC2 164 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 HACD2Q6Y1H2 254 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 LDB1Q86U70 411 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 DIS3LQ8TF46 1054 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 PRKD2Q9BZL6 878 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 CLK4Q9HAZ1 481 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 CIDEBQ9UHD4 219 aa13.29□□□□□ -0.28
SLC28A1-201ENST00000286749 CCL22O00626 93 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 PAGE1O75459 146 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 UGT1A6P19224 532 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 BDNFP23560 247 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 KCNC1P48547 511 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 STX1BP61266 288 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 LPIN1Q14693 890 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 MFSD10Q14728 455 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 ACAP2Q15057 778 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 KIF19Q2TAC6 998 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 PPP4R4Q6NUP7 873 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 ERMP1Q7Z2K6 904 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 SLC22A9Q8IVM8 553 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 TMEM86AQ8N2M4 240 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 IRGQQ8WZA9 623 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 EXT2Q93063 718 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 C19orf60Q96EN9 201 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 TSPAN17Q96FV3 270 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 UBXN10Q96LJ8 280 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 TCF12Q99081 682 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 GIMAP2Q9UG22 337 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 AURKCQ9UQB9 309 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 SQORQ9Y6N5 450 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 NME4O00746 187 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 MSI1O43347 362 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 GNAO1P09471 354 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 BMP2P12643 396 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 IMPDH1P20839 514 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 GPX3P22352 226 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 LEPRP48357 1165 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 GALNT1Q10472 559 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 GPR158Q5T848 1215 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 TMEM207Q6UWW9 146 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 PIM3Q86V86 326 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 CBR4Q8N4T8 237 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 TFAP2CQ92754 450 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 TINF2Q9BSI4 451 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 ARMC1Q9NVT9 282 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 SLC8A2Q9UPR5 921 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 PTGDR2Q9Y5Y4 395 aa13.28□□□□□ -0.28
SLC28A1-201ENST00000286749 COL4A4P53420 1690 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms