RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZFP42Q96MM3 310 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 EML4Q9HC35 981 aaKnown RBP13□□□□□ -0.33
C9orf3-201ENST00000277198 TMEM161AQ9NX61 479 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 EPS15L1Q9UBC2 864 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 NEU3Q9UQ49 428 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 TTC28Q96AY4 2481 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 KIAA1671Q9BY89 1806 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 H3BNC9 293 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 NEMP1O14524 444 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 MAFKO60675 156 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 VAPBO95292 243 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 PENKP01210 267 aaPredicted RBP13□□□□□ -0.33
C9orf3-201ENST00000277198 POU3F3P20264 500 aaPredicted RBP13□□□□□ -0.33
C9orf3-201ENST00000277198 ARNTP27540 789 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 AFF1P51825 1210 aaKnown RBP13□□□□□ -0.33
C9orf3-201ENST00000277198 STX5Q13190 355 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 CAMK1Q14012 370 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 CHSY3Q70JA7 882 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 DQX1Q8TE96 717 aaKnown RBP13□□□□□ -0.33
C9orf3-201ENST00000277198 EDEM1Q92611 657 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 RNF34Q969K3 372 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 RCN3Q96D15 328 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 CASD1Q96PB1 797 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 TMEM30AQ9NV96 361 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 TBC1D13Q9NVG8 400 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 UBP1Q9NZI7 540 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 RIMS3Q9UJD0 308 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 GIT1Q9Y2X7 761 aa13□□□□□ -0.33
C9orf3-201ENST00000277198 FNDC1Q4ZHG4 1894 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 C5orf42Q9H799 3197 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 A0A0U1RQF3 1178 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 PRSS51A0A1B0GVH4 220 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 GOLGA8TH3BQL2 631 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 SLC26A3P40879 764 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 GLRBP48167 497 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 SLC12A2P55011 1212 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 NRG1Q02297 640 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 MAPRE1Q15691 268 aaKnown RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 CNGA3Q16281 694 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 MANEALQ5VSG8 457 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 RANBP10Q6VN20 620 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 PELI3Q8N2H9 469 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 RIN3Q8TB24 985 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 FATE1Q969F0 183 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 NXNL1Q96CM4 212 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 CELF6Q96J87 481 aaKnown RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 MRPL1Q9BYD6 325 aaKnown RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 ARNT2Q9HBZ2 717 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 FAM105AQ9NUU6 356 aa12.99□□□□□ -0.33
C9orf3-201ENST00000277198 COPG1Q9Y678 874 aaKnown RBP12.99□□□□□ -0.33
C9orf3-201ENST00000277198 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CAPN8A6NHC0 703 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TRIM38O00635 465 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ACOT8O14734 319 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 IRAK2O43187 625 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 DNAJA2O60884 412 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CYP11A1P05108 521 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ITGB1P05556 798 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 RBP1P09455 135 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ODC1P11926 461 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 XRCC1P18887 633 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SAT1P21673 171 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 RPL5P46777 297 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CLCNKBP51801 687 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CREB5Q02930 508 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CEACAM7Q14002 265 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 POU6F1Q14863 301 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SLC14A2Q15849 920 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TSTD2Q5T7W7 516 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 AGAP9Q5VTM2 703 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 AFMIDQ63HM1 303 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 NXNQ6DKJ4 435 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 RWDD4Q6NW29 188 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ESRP1Q6NXG1 681 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 METTL23Q86XA0 190 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CEP97Q8IW35 865 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 KLHL23Q8NBE8 558 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 IPMKQ8NFU5 416 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SPATA22Q8NHS9 363 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ASB9Q96DX5 294 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TSPAN17Q96FV3 270 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CATSPER2Q96P56 530 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TRMOQ9BU70 441 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CWH43Q9H720 699 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ELAC1Q9H777 363 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ABCC13Q9NSE7 274 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SUCOQ9UBS9 1254 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms