RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TAC4Q86UU9 113 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 FAM35AQ86V20 835 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 GSTO2Q9H4Y5 243 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 MROH8Q9H579 483 aa27.61■■■□□ 2.01
CBX4-201ENST00000269397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP27.61■■■□□ 2.01
CBX4-201ENST00000269397 FAM155AB1AL88 458 aaPredicted RBP27.6■■■□□ 2.01
CBX4-201ENST00000269397 DNAJB1P25685 340 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 KPNA2P52292 529 aaKnown RBP27.6■■■□□ 2.01
CBX4-201ENST00000269397 AGAP9Q5VTM2 703 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 C8orf82Q6P1X6 216 aaPredicted RBP27.6■■■□□ 2.01
CBX4-201ENST00000269397 DUS3LQ96G46 650 aaKnown RBP27.6■■■□□ 2.01
CBX4-201ENST00000269397 FBXL20Q96IG2 436 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 BIRC8Q96P09 236 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 TREX1Q9NSU2 369 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 DSEQ9UL01 958 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 ZNF510Q9Y2H8 683 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 RNF103-CHMP3A0A140T963 221 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 LTA4HP09960 611 aaKnown RBP27.6■■■□□ 2.01
CBX4-201ENST00000269397 ESRRGP62508 458 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 PSMD5Q16401 504 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 ELMSAN1Q6PJG2 1045 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 LARP4Q71RC2 724 aaKnown RBP eCLIP27.6■■■□□ 2.01
CBX4-201ENST00000269397 OFCC1Q8IZS5 231 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 TOP6BLQ8N6T0 577 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 CYGBQ8WWM9 190 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 OSBPL6Q9BZF3 934 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 MAP10Q9P2G4 905 aa27.6■■■□□ 2.01
CBX4-201ENST00000269397 CEP350Q5VT06 3117 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 HLA-DQB2P05538 268 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 OXTRP30559 389 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 CXCR3P49682 368 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 ZBTB46Q86UZ6 589 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 GPR180Q86V85 440 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 KLHL23Q8NBE8 558 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 ADI1Q9BV57 179 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 TANC1Q9C0D5 1861 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 CACNG3O60359 315 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 ANXA9O76027 345 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 GPR158Q5T848 1215 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 DNAJB3Q8WWF6 145 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 FCRL5Q96RD9 977 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 CNGB3Q9NQW8 809 aa27.59■■■□□ 2.01
CBX4-201ENST00000269397 A0A0J9YYE9 177 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 PSMD3O43242 534 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 ATE1O95260 518 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 POLD2P49005 469 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 STX1BP61266 288 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 PIM3Q86V86 326 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 ARHGAP12Q8IWW6 846 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 BBS5Q8N3I7 341 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 C19orf60Q96EN9 201 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 SOX17Q9H6I2 414 aaPredicted RBP27.58■■■□□ 2.01
CBX4-201ENST00000269397 AKTIPQ9H8T0 292 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 ARMC1Q9NVT9 282 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 RBM22Q9NW64 420 aaKnown RBP eCLIP27.58■■■□□ 2.017e-7■■■■□ 21
CBX4-201ENST00000269397 A0A087WXM4 84 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 DHRS12A0PJE2 317 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 XPOTO43592 962 aaKnown RBP27.58■■■□□ 2.01
CBX4-201ENST00000269397 ZNF189O75820 626 aaPredicted RBP27.58■■■□□ 2.01
CBX4-201ENST00000269397 MMP3P08254 477 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 PAMP19021 973 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 DNAJB2P25686 324 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 ACBD5Q5T8D3 534 aaPredicted RBP27.58■■■□□ 2.01
CBX4-201ENST00000269397 BHLHA9Q7RTU4 235 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 CCM2LQ9NUG4 571 aaPredicted RBP27.58■■■□□ 2.01
CBX4-201ENST00000269397 OAZ3Q9UMX2 235 aa27.58■■■□□ 2.01
CBX4-201ENST00000269397 ANKRD12Q6UB98 2062 aa27.57■■■□□ 2
CBX4-201ENST00000269397 MEIS3P2A8K0S8 358 aa27.57■■■□□ 2
CBX4-201ENST00000269397 KCNE1P15382 129 aa27.57■■■□□ 2
CBX4-201ENST00000269397 SMPD1P17405 629 aa27.57■■■□□ 2
CBX4-201ENST00000269397 GPX3P22352 226 aa27.57■■■□□ 2
CBX4-201ENST00000269397 SLC5A3P53794 718 aa27.57■■■□□ 2
CBX4-201ENST00000269397 GEN1Q17RS7 908 aa27.57■■■□□ 2
CBX4-201ENST00000269397 PM20D1Q6GTS8 502 aa27.57■■■□□ 2
CBX4-201ENST00000269397 TMEM207Q6UWW9 146 aa27.57■■■□□ 2
CBX4-201ENST00000269397 ZNF554Q86TJ5 538 aa27.57■■■□□ 2
CBX4-201ENST00000269397 RYBPQ8N488 228 aaPredicted RBP27.57■■■□□ 2
CBX4-201ENST00000269397 MRGPRX2Q96LB1 330 aa27.57■■■□□ 2
CBX4-201ENST00000269397 SLC39A8Q9C0K1 460 aa27.57■■■□□ 2
CBX4-201ENST00000269397 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.57■■■□□ 2
CBX4-201ENST00000269397 ZNF711Q9Y462 761 aa27.57■■■□□ 2
CBX4-201ENST00000269397 IPPQ9Y573 584 aa27.57■■■□□ 2
CBX4-201ENST00000269397 LRRC14BA6NHZ5 514 aa27.57■■■□□ 2
CBX4-201ENST00000269397 MAFKO60675 156 aa27.57■■■□□ 2
CBX4-201ENST00000269397 IMPDH2P12268 514 aa27.57■■■□□ 2
CBX4-201ENST00000269397 ADRA1AP35348 466 aa27.57■■■□□ 2
CBX4-201ENST00000269397 NUP107P57740 925 aa27.57■■■□□ 2
CBX4-201ENST00000269397 MERTKQ12866 999 aa27.57■■■□□ 2
CBX4-201ENST00000269397 ZBED5Q49AG3 693 aa27.57■■■□□ 2
CBX4-201ENST00000269397 UBXN11Q5T124 520 aa27.57■■■□□ 2
CBX4-201ENST00000269397 DCLRE1AQ6PJP8 1040 aa27.57■■■□□ 2
CBX4-201ENST00000269397 CHST15Q7LFX5 561 aaPredicted RBP27.57■■■□□ 2
CBX4-201ENST00000269397 IFNEQ86WN2 208 aa27.57■■■□□ 2
CBX4-201ENST00000269397 PGAP3Q96FM1 320 aaPredicted RBP27.57■■■□□ 2
CBX4-201ENST00000269397 TSGA13Q96PP4 275 aa27.57■■■□□ 2
CBX4-201ENST00000269397 GPR107Q5VW38 600 aa27.56■■■□□ 2
CBX4-201ENST00000269397 ERO1BQ86YB8 467 aa27.56■■■□□ 2
CBX4-201ENST00000269397 CAMK1DQ8IU85 385 aa27.56■■■□□ 2
CBX4-201ENST00000269397 CMTR2Q8IYT2 770 aaKnown RBP27.56■■■□□ 2
CBX4-201ENST00000269397 PLGRKTQ9HBL7 147 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms