RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ULK1O75385 1050 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 CDK14O94921 469 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 CBX6O95503 412 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 COX7A2P14406 83 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 HADHBP55084 474 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 GAD2Q05329 585 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 HNRNPDQ14103 355 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 TXNDC8Q6A555 127 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 TMEM110Q86TL2 294 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 SERINC5Q86VE9 423 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 RAVER1Q8IY67 606 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 OR14C36Q8NHC7 312 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 MARK4Q96L34 752 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 TMEM237Q96Q45 408 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 DTLQ9NZJ0 730 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 NR2E1Q9Y466 385 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 INSIG1O15503 277 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 HNRNPLP14866 589 aaKnown RBP eCLIP13.76□□□□□ -0.216e-6■□□□□ 11.3
NPC1-201ENST00000269228 POU1F1P28069 291 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 VHLP40337 213 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 IL10RBQ08334 325 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 OLFM3Q96PB7 478 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 ABCB8Q9NUT2 735 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 KCNK4Q9NYG8 393 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 MLYCDO95822 493 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 CXCR2P25025 360 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 RRM2P31350 389 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 ERVK-21P61565 698 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 ELP6Q0PNE2 266 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 XKR6Q5GH73 641 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 CRELD2Q6UXH1 353 aaPredicted RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 HFE2Q6ZVN8 426 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 TAS1R3Q7RTX0 852 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 PIWIL4Q7Z3Z4 852 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 UBE2E3Q969T4 207 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 ZBED3Q96IU2 234 aaPredicted RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 SPACA7Q96KW9 195 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 FERD3LQ96RJ6 166 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 WRAP53Q9BUR4 548 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 SLC25A23Q9BV35 468 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 ACAT2Q9BWD1 397 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 MYLK2Q9H1R3 596 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 NMUR1Q9HB89 426 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 RPS6KB2Q9UBS0 482 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 BTRCQ9Y297 605 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 A0A088AWK7 358 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 GCATO75600 419 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 FAM155BO75949 473 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 POP4O95707 220 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 ZNF865P0CJ78 1059 aaPredicted RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 ZNF10P21506 573 aaPredicted RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 HPCAL1P37235 193 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 FRG1Q14331 258 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 CPSF6Q16630 551 aaKnown RBP eCLIP13.76□□□□□ -0.21
NPC1-201ENST00000269228 TCHHL1Q5QJ38 904 aaPredicted RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 C17orf99Q6UX52 265 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 TIFAQ96CG3 184 aa13.76□□□□□ -0.21
NPC1-201ENST00000269228 IMP3Q9NV31 184 aaKnown RBP13.76□□□□□ -0.21
NPC1-201ENST00000269228 MYADML2A6NDP7 307 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 BMP10O95393 424 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 CDH13P55290 713 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 DAB2P98082 770 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 ATXN7L2Q5T6C5 722 aaPredicted RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 SPPL2AQ8TCT8 520 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 NSMCE2Q96MF7 247 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 SCN3BQ9NY72 215 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 CD84Q9UIB8 345 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 STYXL1Q9Y6J8 313 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 C2P06681 752 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 PKMP14618 531 aaKnown RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 RANBP1P43487 201 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 SKP1P63208 163 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 TRAF2Q12933 501 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 TMED1Q13445 227 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 FASTKD3Q14CZ7 662 aaKnown RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 ATAD3BQ5T9A4 648 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 TRABD2AQ86V40 505 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 CYP4Z1Q86W10 505 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 AP2M1Q96CW1 435 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 PHPT1Q9NRX4 125 aaPredicted RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 CHD4Q14839 1912 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 GSTM1P09488 218 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 NOVP48745 357 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 ASTE1Q2TB18 679 aaPredicted RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 GPRIN3Q6ZVF9 776 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 VPS33AQ96AX1 596 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 FEM1CQ96JP0 617 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 QRFPRQ96P65 431 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
NPC1-201ENST00000269228 CCDC88AQ3V6T2 1871 aa13.75□□□□□ -0.21
NPC1-201ENST00000269228 ENPP3O14638 875 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms