RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 ARHGEF18Q6ZSZ5 1173 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 DPPA4Q7L190 304 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 TSPAN33Q86UF1 283 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 ZCCHC9Q8N567 271 aaKnown RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 IPMKQ8NFU5 416 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 CXorf40AQ8TE69 158 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 MRGPRX2Q96LB1 330 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 MCCC1Q96RQ3 725 aaPredicted RBP12.82□□□□□ -0.36
SS18-202ENST00000269138 MYOCQ99972 504 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 C1QTNF2Q9BXJ5 285 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 FZD3Q9NPG1 666 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 PPIL1Q9Y3C6 166 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 PCDHGA5Q9Y5G8 931 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 DMDP11532 3685 aa12.82□□□□□ -0.36
SS18-202ENST00000269138 ANKRD36A6QL64 1941 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 MYO15AQ9UKN7 3530 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 A0A0J9YYE9 177 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 RAD51BO15315 384 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
SS18-202ENST00000269138 AGTP01019 485 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 TRBC1P01850 177 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 CA4P22748 312 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 LHCGRP22888 699 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 VIPR1P32241 457 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 CHRNA4P43681 627 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 SPARCL1Q14515 664 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 PARP6Q2NL67 630 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 PLA2G2CQ5R387 149 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 PEAR1Q5VY43 1037 aaPredicted RBP12.81□□□□□ -0.36
SS18-202ENST00000269138 LAYNQ6UX15 382 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 RUBCNQ92622 972 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 RMDN1Q96DB5 314 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 IFT43Q96FT9 208 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 SCRN2Q96FV2 425 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 SLC6A18Q96N87 628 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 NAP1L3Q99457 506 aaPredicted RBP12.81□□□□□ -0.36
SS18-202ENST00000269138 SLC17A9Q9BYT1 436 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 TM9SF3Q9HD45 589 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 PARD6AQ9NPB6 346 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 FSCN3Q9NQT6 498 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 HOMER3Q9NSC5 361 aa12.81□□□□□ -0.36
SS18-202ENST00000269138 CEP192Q8TEP8 1941 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 LOC285095A0A1B0GVY8 99 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 ANKRD66B4E2M5 251 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 BCAT2O15382 392 aaPredicted RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 ANXA9O76027 345 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 NDST3O95803 873 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 ATXN1LP0C7T5 689 aaKnown RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 PIRTP0C851 137 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 C6P13671 934 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 GM2AP17900 193 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 TGM1P22735 817 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 COILP38432 576 aaPredicted RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 GEMP55040 296 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 RPL26P61254 145 aaKnown RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 SGCGQ13326 291 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 MPP3Q13368 585 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 CNGA3Q16281 694 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 P3H1Q32P28 736 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 SETMARQ53H47 684 aaPredicted RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 TCEAL6Q6IPX3 200 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 CRTC1Q6UUV9 634 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 KDM7AQ6ZMT4 941 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 RFLNAQ6ZTI6 216 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 USP45Q70EL2 814 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 SLC25A41Q8N5S1 370 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 C12orf50Q8NA57 414 aaPredicted RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 TCEAL3Q969E4 200 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 FICDQ9BVA6 458 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 ADGRE3Q9BY15 652 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 VPS45Q9NRW7 570 aa12.8□□□□□ -0.36
SS18-202ENST00000269138 RPL26L1Q9UNX3 145 aaKnown RBP12.8□□□□□ -0.36
SS18-202ENST00000269138 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 GFRA3O60609 400 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 TM7SF2O76062 418 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 HEXIM1O94992 359 aaKnown RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 WNT1P04628 370 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 CFIP05156 583 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 ELFN1P0C7U0 828 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 CYP2A6P11509 494 aaPredicted RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 ADRA1AP35348 466 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 GRIA4P48058 902 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 CLDN2P57739 230 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 SF3A2Q15428 464 aaKnown RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 TRIP13Q15645 432 aaPredicted RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 CDKN3Q16667 212 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 SIRPB2Q5JXA9 342 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 DENND2CQ68D51 928 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms