RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 PRRT4C9JH25 899 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 SOX1O00570 391 aaPredicted RBP16.21■□□□□ 0.18
PCTP-201ENST00000268896 PGLSO95336 258 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 ITGA2BP08514 1039 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 RPA3P35244 121 aaPredicted RBP16.21■□□□□ 0.18
PCTP-201ENST00000268896 MTHFRP42898 656 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 SLC1A2P43004 574 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 SERPINB9P50453 376 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 FCHO2Q0JRZ9 810 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 NAB1Q13506 487 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 RUNX3Q13761 415 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 FRG1Q14331 258 aaKnown RBP16.21■□□□□ 0.18
PCTP-201ENST00000268896 CARD16Q5EG05 197 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 ZNF470Q6ECI4 717 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 GRAMD4Q6IC98 578 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 LDB1Q86U70 411 aaPredicted RBP16.21■□□□□ 0.18
PCTP-201ENST00000268896 PTPRN2Q92932 1015 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 MSLNLQ96KJ4 702 aa16.21■□□□□ 0.18
PCTP-201ENST00000268896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.2■□□□□ 0.18
PCTP-201ENST00000268896 ANTXRLA6NF34 631 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 TRAFD1O14545 582 aaPredicted RBP16.2■□□□□ 0.18
PCTP-201ENST00000268896 FZD6O60353 706 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 SAT1P21673 171 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 CCDC85BQ15834 202 aaPredicted RBP16.2■□□□□ 0.18
PCTP-201ENST00000268896 ZSCAN26Q16670 478 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 RALGPS1Q5JS13 557 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 GRTP1Q5TC63 336 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 ZSWIM9Q86XI8 627 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 CPA6Q8N4T0 437 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 PCDH20Q8N6Y1 951 aaKnown RBP16.2■□□□□ 0.18
PCTP-201ENST00000268896 OR4K2Q8NGD2 314 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 PIH1D2Q8WWB5 315 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 LRCH3Q96II8 777 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 RBBP8Q99708 897 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 SLC13A1Q9BZW2 595 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 FBXO6Q9NRD1 293 aaPredicted RBP16.2■□□□□ 0.18
PCTP-201ENST00000268896 PCMTD2Q9NV79 361 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 SENP1Q9P0U3 644 aa16.2■□□□□ 0.18
PCTP-201ENST00000268896 TPP1O14773 563 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 RFPL1O75677 317 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 CRTAMO95727 393 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 UGT2B4P06133 528 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 PRSS56P0CW18 603 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 SERPINA4P29622 427 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 GMPRP36959 345 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 NNMTP40261 264 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 CSNK1DP48730 415 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 PGGT1BP53609 377 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 PDE1BQ01064 536 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 PTPRNQ16849 979 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 LRRC73Q5JTD7 316 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 NEPROQ6NW34 567 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 ACVR1CQ8NER5 493 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 ISG20Q96AZ6 181 aaKnown RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 CEP44Q9C0F1 390 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 CAB39LQ9H9S4 337 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 ELOVL2Q9NXB9 296 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 NKIRAS1Q9NYS0 192 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 MTO1Q9Y2Z2 717 aaKnown RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 USP15Q9Y4E8 981 aaPredicted RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 NUMBLQ9Y6R0 609 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 PRUNE2Q8WUY3 3088 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 PAPSS2O95340 614 aaPredicted RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 TOP3BO95985 862 aaKnown RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 GSRP00390 522 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 GOT2P00505 430 aaKnown RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 ATP5BP06576 529 aaKnown RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 DLDP09622 509 aaKnown RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 GJA4P35212 333 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 MAPK8P45983 427 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 RECQLP46063 649 aaPredicted RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 SOX9P48436 509 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 POM121L1PQ3SYA9 428 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 ZNF449Q6P9G9 518 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 CMC1Q7Z7K0 106 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 DCLK2Q8N568 766 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 KIAA1958Q8N8K9 716 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 SMRP1Q8NCR6 262 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 OR2A12Q8NGT7 310 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 BCAS4Q8TDM0 211 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 DYDC1Q8WWB3 177 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 E2F7Q96AV8 911 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 EPN3Q9H201 632 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 POLR3BQ9NW08 1133 aaPredicted RBP16.19■□□□□ 0.18
PCTP-201ENST00000268896 COL4A3Q01955 1670 aa16.19■□□□□ 0.18
PCTP-201ENST00000268896 CCDC162PA2VCL2 907 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 GOLGA8CPA6NN73 597 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 C2orf81A6NN90 581 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 TYROBPO43914 113 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 AHSGP02765 367 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 HLA-EP13747 358 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 GABRB3P28472 473 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 SPRP35270 261 aaPredicted RBP16.18■□□□□ 0.18
PCTP-201ENST00000268896 ZNF140P52738 457 aaPredicted RBP16.18■□□□□ 0.18
PCTP-201ENST00000268896 TAF1AQ15573 450 aaPredicted RBP16.18■□□□□ 0.18
PCTP-201ENST00000268896 ZNF789Q5FWF6 425 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 FSTL4Q6MZW2 842 aa16.18■□□□□ 0.18
PCTP-201ENST00000268896 NLRP9Q7RTR0 991 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms