RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 KCTD3Q9Y597 815 aa12.97□□□□□ -0.33
CPSF6-201ENST00000266679 A8MT66 165 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 SDHDO14521 159 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 RAMP2O60895 175 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 LTA4HP09960 611 aaKnown RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 ARSAP15289 507 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 LEPRP48357 1165 aaKnown RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 DNAJB13P59910 316 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 PFKPQ01813 784 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 POLD3Q15054 466 aaPredicted RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 MGAT5BQ3V5L5 792 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 C9orf50Q5SZB4 431 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 RASIP1Q5U651 963 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 AGAP9Q5VTM2 703 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 FAM219BQ5XKK7 198 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 LPCAT4Q643R3 524 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 PIWIL4Q7Z3Z4 852 aaKnown RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 ADGRG6Q86SQ4 1221 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 DSELQ8IZU8 1212 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 KYQ8NBH2 561 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 RP9Q8TA86 221 aaKnown RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 HDAC10Q969S8 669 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 TSPAN17Q96FV3 270 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 VPS45Q9NRW7 570 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 MARCH4Q9P2E8 410 aaPredicted RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 COPG1Q9Y678 874 aaKnown RBP12.96□□□□□ -0.33
CPSF6-201ENST00000266679 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
CPSF6-201ENST00000266679 IGLV3-10A0A075B6K4 115 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 CFLARO15519 480 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 SLC4A1P02730 911 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 UBTFL6P0CB48 400 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 ENO3P13929 434 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 SP100P23497 879 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 MAGEA11P43364 429 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 GATMP50440 423 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 CDKN2DP55273 166 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 PRAMEP78395 509 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 SULT2A1Q06520 285 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 MSLNQ13421 630 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 KLC3Q6P597 504 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 BNC2Q6ZN30 1099 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 SETD3Q86TU7 594 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 PIM3Q86V86 326 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 CILP2Q8IUL8 1156 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 TEX26Q8N6G2 289 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 GABPB2Q8TAK5 448 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 ARRDC2Q8TBH0 407 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 ANKRD49Q8WVL7 239 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 FATE1Q969F0 183 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 TLR8Q9NR97 1041 aaKnown RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-201ENST00000266679 HCSTQ9UBK5 93 aa12.96□□□□□ -0.34
CPSF6-201ENST00000266679 TRPC5OSA6NMA1 111 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 SYN3O14994 580 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 ATXN1LP0C7T5 689 aaKnown RBP12.95□□□□□ -0.34
CPSF6-201ENST00000266679 PEX2P28328 305 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 PKNOX1P55347 436 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 LBRQ14739 615 aaKnown RBP12.95□□□□□ -0.34
CPSF6-201ENST00000266679 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
CPSF6-201ENST00000266679 PHF21BQ96EK2 531 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 SEMA3CQ99985 751 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 GPR62Q9BZJ7 368 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 MFSD1Q9H3U5 465 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 ZBTB26Q9HCK0 441 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 TNFRSF12AQ9NP84 129 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 PRPF19Q9UMS4 504 aaKnown RBP12.95□□□□□ -0.34
CPSF6-201ENST00000266679 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
CPSF6-201ENST00000266679 MROH6A6NGR9 719 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SLC22A2O15244 555 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SLC7A4O43246 635 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-201ENST00000266679 CLTBP09497 229 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 OR1E1P30953 314 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 THOP1P52888 689 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 IL10RBQ08334 325 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SERINC3Q13530 473 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 GALNT3Q14435 633 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 PTPRCAPQ14761 206 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 HERC3Q15034 1050 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 GPR158Q5T848 1215 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 GK5Q6ZS86 529 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 BLOC1S5Q8TDH9 187 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 SH3RF2Q8TEC5 729 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 GIPC2Q8TF65 315 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 STON2Q8WXE9 905 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 EXT2Q93063 718 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 CDRT15Q96T59 188 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 NPAS2Q99743 824 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 VCXQ9H320 206 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 ALG9Q9H6U8 611 aa12.94□□□□□ -0.34
CPSF6-201ENST00000266679 OLA1Q9NTK5 396 aaKnown RBP12.94□□□□□ -0.34
CPSF6-201ENST00000266679 DONSONQ9NYP3 566 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms