RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TXNDC9O14530 226 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 UBFD1O14562 309 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 CLGNO14967 610 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 LTA4HP09960 611 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 RPL5P46777 297 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 KCNC1P48547 511 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 CSHL1Q14406 222 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 GK3PQ14409 553 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 SQLEQ14534 574 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 FAM83EQ2M2I3 478 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 MGAT5BQ3V5L5 792 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 IRAK1BP1Q5VVH5 260 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 TMEM207Q6UWW9 146 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 HACD2Q6Y1H2 254 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 CUZD1Q86UP6 607 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 UMODL1-AS1Q8N2C9 162 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 METTL25Q8N6Q8 603 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 DIS3LQ8TF46 1054 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 SLCO4A1Q96BD0 722 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 SLC39A13Q96H72 371 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 Q9H521 79 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 AGO3Q9H9G7 860 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 MRGBPQ9NV56 204 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 SFMBT1Q9UHJ3 866 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 TCRBV3S1A0A5B6 114 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 HEATR9A2RTY3 570 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 MROH6A6NGR9 719 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 MSI1O43347 362 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 RBP1P09455 135 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 SLC26A3P40879 764 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 ATP4BP51164 291 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 SLC5A3P53794 718 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 STX5Q13190 355 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 DSC3Q14574 896 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 ACAP2Q15057 778 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 PPP1R3AQ16821 1122 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 UGT3A2Q3SY77 523 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 AGAP9Q5VTM2 703 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 IL23RQ5VWK5 629 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 REP15Q6BDI9 236 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 PAOXQ6QHF9 649 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 LARP4Q71RC2 724 aaKnown RBP eCLIP12.51□□□□□ -0.41
BEST3-201ENST00000266661 TEX26Q8N6G2 289 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 FAM156AQ8NDB6 213 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 DGCR14Q96DF8 476 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 L3HYPDHQ96EM0 354 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 NDNQ99608 321 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 MRPL1Q9BYD6 325 aaKnown RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
BEST3-201ENST00000266661 PADI4Q9UM07 663 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 LZTS1Q9Y250 596 aa12.51□□□□□ -0.41
BEST3-201ENST00000266661 C7orf72A4D263 438 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 PRORSD1PA6NEY8 169 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 SLC7A4O43246 635 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 MGEA5O60502 916 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 S1PR4O95977 384 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 IMPDH1P20839 514 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 HSPA13P48723 471 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
BEST3-201ENST00000266661 TIAL1Q01085 375 aaKnown RBP eCLIP12.5□□□□□ -0.41
BEST3-201ENST00000266661 RHDQ02161 417 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 HECTD2Q5U5R9 776 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 FAM45BPQ6NSW5 357 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 RPS27LQ71UM5 84 aaKnown RBP12.5□□□□□ -0.41
BEST3-201ENST00000266661 CILP2Q8IUL8 1156 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
BEST3-201ENST00000266661 PCDH20Q8N6Y1 951 aaKnown RBP12.5□□□□□ -0.41
BEST3-201ENST00000266661 FAM45AQ8TCE6 357 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 CALML6Q8TD86 181 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 ATP6V1E2Q96A05 226 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
BEST3-201ENST00000266661 ZNF597Q96LX8 424 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 TRMOQ9BU70 441 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 MPP6Q9NZW5 540 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
BEST3-201ENST00000266661 PSMD12O00232 456 aaPredicted RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 UBDO15205 165 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 ADAMTS4O75173 837 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 PGM3O95394 542 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 ETS2P15036 469 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 HDCP19113 662 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 PAX3P23760 479 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 ACADVLP49748 655 aa12.49□□□□□ -0.41
BEST3-201ENST00000266661 SERPINH1P50454 418 aaKnown RBP12.49□□□□□ -0.41
BEST3-201ENST00000266661 CDKN2DP55273 166 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms