RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 SETMARQ53H47 684 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ERAP2Q6P179 960 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 BRAT1Q6PJG6 821 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 RFLNAQ6ZTI6 216 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 NYAP1Q6ZVC0 841 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 BZW1Q7L1Q6 419 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 CDKL3Q8IVW4 592 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PELI3Q8N2H9 469 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 GLIS1Q8NBF1 620 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 C1orf216Q8TAB5 229 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 DNASE2BQ8WZ79 361 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 RMDN1Q96DB5 314 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 LOXL4Q96JB6 756 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 CAPZA3Q96KX2 299 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 TEKT5Q96M29 485 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF641Q96N77 438 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 AP1M1Q9BXS5 423 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 GLOD4Q9HC38 313 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PIH1D1Q9NWS0 290 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 RSPH14Q9UHP6 348 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SHOC2Q9UQ13 582 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCDHGA5Q9Y5G8 931 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ASXL3Q9C0F0 2248 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 AKAP13Q12802 2813 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 A0A1B0GTW7 788 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 HTRA2O43464 458 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SOCS5O75159 536 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PRLP01236 227 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCCBP05166 539 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF806P0C7X5 589 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ETS1P14921 441 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 KCNJ1P48048 391 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 CSNK1DP48730 415 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 AFF3P51826 1226 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ATXN3P54252 364 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 RPS21P63220 83 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SKOR1P84550 965 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 RALGDSQ12967 914 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 GRM3Q14832 879 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 CNGA3Q16281 694 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 CSRP2Q16527 193 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 KIF19Q2TAC6 998 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF542PQ5EBM4 170 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SPDYCQ5MJ68 293 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 TPRG1LQ5T0D9 272 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 ALG1LQ6GMV1 187 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 TRIM69Q86WT6 500 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC25A41Q8N5S1 370 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 OR13H1Q8NG92 308 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 IMP4Q96G21 291 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 FEM1CQ96JP0 617 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 NUSAP1Q9BXS6 441 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC17A9Q9BYT1 436 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SUDS3Q9H7L9 328 aaPredicted RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCDH9Q9HC56 1237 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 MBNL1Q9NR56 388 aaKnown RBP7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 DKK3Q9UBP4 350 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 IGF2RP11717 2491 aa7.28□□□□□ -1.24
DEPDC1B-201ENST00000265036 LAMA5O15230 3695 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 TSPAN11A1L157 253 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 C4orf47A7E2U8 309 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 K7ESM1 405 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 LZTS3O60299 673 aaPredicted RBP7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 SDC3O75056 442 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ETV3P41162 512 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 VPS41P49754 854 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 CCDC15Q0P6D6 951 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ELP6Q0PNE2 266 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 SGCGQ13326 291 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 SPARCL1Q14515 664 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ACOX1Q15067 660 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 DUOXA1Q1HG43 343 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 LONRF2Q1L5Z9 754 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ANKRD20A2Q5SQ80 823 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ANKRD20A1Q5TYW2 823 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ANKRD20A3Q5VUR7 823 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 LRRC66Q68CR7 880 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 GCNT7Q6ZNI0 430 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 MINDY1Q8N5J2 469 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 PIH1D2Q8WWB5 315 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 GORASP1Q9BQQ3 440 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 CAPN10Q9HC96 672 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 SUSD2Q9UGT4 822 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF148Q9UQR1 794 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 EFR3BQ9Y2G0 817 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 JRKLQ9Y4A0 524 aa7.27□□□□□ -1.24
DEPDC1B-201ENST00000265036 ARHGEF17Q96PE2 2063 aaPredicted RBP7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 SCN8AQ9UQD0 1980 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 C1orf232A0A0U1RR37 186 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 TSPAN6O43657 245 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 BUD23O43709 281 aaKnown RBP7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 LIASO43766 372 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 TM7SF2O76062 418 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 RECQL5O94762 991 aaPredicted RBP7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZSCAN5DPP0CG00 497 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 THEGLP0DJG4 465 aa7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 HNRNPA2B1P22626 353 aaKnown RBP7.27□□□□□ -1.25
DEPDC1B-201ENST00000265036 CD38P28907 300 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms