RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TPH1P17752 444 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 RFC2P35250 354 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 IGBP1P78318 339 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 KIF19Q2TAC6 998 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 RBM48Q5RL73 367 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF618Q5T7W0 954 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 LARP4Q71RC2 724 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 IGFN1Q86VF2 1251 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 TMEM130Q8N3G9 435 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 PAPD5Q8NDF8 572 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 S100ZQ8WXG8 99 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 FAM149B1Q96BN6 582 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 HDAC11Q96DB2 347 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 PSD2Q9BQI7 771 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 BDH2Q9BUT1 245 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 NAA50Q9GZZ1 169 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 OSBPL2Q9H1P3 480 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 MINDY3Q9H8M7 445 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 RMI1Q9H9A7 625 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 NANOGQ9H9S0 305 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 SPATA7Q9P0W8 599 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 SFMBT1Q9UHJ3 866 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 TRPC5Q9UL62 973 aaPredicted RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 GIT1Q9Y2X7 761 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 AAR2Q9Y312 384 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 DERAQ9Y315 318 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 KRBA1A5PL33 1030 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 FAM149AA5PLN7 773 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 HBP1O60381 514 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ABCB7O75027 752 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ERCC2P18074 760 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 NFKB1P19838 968 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 MATN1P21941 496 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 GPX3P22352 226 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ADARB1P78563 741 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 GNA12Q03113 381 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 PPP1R3AQ16821 1122 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 PPHLN1Q8NEY8 458 aaKnown RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 TSPAN17Q96FV3 270 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 CPB2Q96IY4 423 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ASB2Q96Q27 587 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 FANCEQ9HB96 536 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 ANAPC2Q9UJX6 822 aa12.44□□□□□ -0.42
CHMP2B-201ENST00000263780 A0A0J9YYE9 177 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TYW5A2RUC4 315 aaKnown RBP12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TPST1O60507 370 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CYP2A13Q16696 494 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CYP51A1Q16850 503 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 NEK10Q6ZWH5 1172 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CPNE9Q8IYJ1 553 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 OFCC1Q8IZS5 231 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 MIER2Q8N344 545 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TSPEARQ8WU66 669 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TEKT5Q96M29 485 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TEPSINQ96N21 525 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF641Q96N77 438 aaPredicted RBP12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 PPP1R2P1Q96PQ5 205 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 APOL2Q9BQE5 337 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ING2Q9H160 280 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CPQQ9Y646 472 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CROCCQ5TZA2 2017 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 A8MT66 165 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 NR5A2O00482 541 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ARPC2O15144 300 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 EDNRBP24530 442 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ADORA2BP29275 332 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ETFBP38117 255 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TAS2R39P59534 338 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TPI1P60174 286 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 PITRM1Q5JRX3 1037 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 DEPDC1Q5TB30 811 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TAF2Q6P1X5 1199 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 KIAA0408Q6ZU52 694 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CRYBG2Q8N1P7 616 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 NETO2Q8NC67 525 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 MAGEE2Q8TD90 523 aaPredicted RBP12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 NT5C3BQ969T7 300 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 C19orf60Q96EN9 201 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CYP2S1Q96SQ9 504 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 GPR20Q99678 358 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 SLC39A3Q9BRY0 314 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 TRIM54Q9BYV2 358 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF639Q9UID6 485 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 CORINQ9Y5Q5 1042 aa12.43□□□□□ -0.42
CHMP2B-201ENST00000263780 M0QYT0 321 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms