RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TRPM7Q96QT4 1865 aa9.17□□□□□ -0.94
MSH4-201ENST00000263187 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 LRRC37A2A6NM11 1700 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 MYADML2A6NDP7 307 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 TRPC5OSA6NMA1 111 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 UBXN8O00124 270 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 MTSS1O43312 755 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SNRPB2P08579 225 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 ALDOCP09972 364 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 ATP6V1B2P21281 511 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 YAP1P46937 504 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 STT3AP46977 705 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 NDST2P52849 883 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 GALNT3Q14435 633 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 HECTD2Q5U5R9 776 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 ZFP1Q6P2D0 407 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 DCLRE1AQ6PJP8 1040 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 CBR4Q8N4T8 237 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 CPSF7Q8N684 471 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 NAT16Q8N8M0 369 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 TRPC4APQ8TEL6 797 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 CYGBQ8WWM9 190 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 NCSTNQ92542 709 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 TBATAQ96M53 351 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 RTP3Q9BQQ7 232 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 MID1IP1Q9NPA3 183 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 GALNT8Q9NY28 637 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 HSFX1Q9UBD0 423 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 ARL5AQ9Y689 179 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 RNF103-CHMP3A0A140T963 221 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 UBA6A0AVT1 1052 aaPredicted RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 KLHL33A6NCF5 533 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 ANXA9O76027 345 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 F2P00734 622 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 RGS2P41220 211 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SCAPQ12770 1279 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 LRP8Q14114 963 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 PTPRRQ15256 657 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 CXCL17Q6UXB2 119 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 PIWIL4Q7Z3Z4 852 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 PSMG2Q969U7 264 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 PTERQ96BW5 349 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 ASB9Q96DX5 294 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SLC9A7Q96T83 725 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 AKTIPQ9H8T0 292 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SPAG4Q9NPE6 437 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SEMA4BQ9NPR2 832 aaPredicted RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 FAM105AQ9NUU6 356 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 CROTQ9UKG9 612 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 A0A1W2PQH9 124 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 C17orf102A2RUQ5 167 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SCAMP3O14828 347 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 NRP2O60462 931 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SRP72O76094 671 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 BAIAP3O94812 1187 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 F9P00740 461 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 SH3BP2P78314 561 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 STX5Q13190 355 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 RPS6KA2Q15349 733 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 ALFQ53S48 1182 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 TECRLQ5HYJ1 363 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 CHSY3Q70JA7 882 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 DHFR2Q86XF0 187 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 TICAM1Q8IUC6 712 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 PTGR2Q8N8N7 351 aaPredicted RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 C2CD4AQ8NCU7 369 aaPredicted RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 RDH11Q8TC12 318 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 TUBGCP3Q96CW5 907 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 HMCESQ96FZ2 354 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 EXOC2Q96KP1 924 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 MRPS26Q9BYN8 205 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 OSER1Q9NX31 292 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 UTP6Q9NYH9 597 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 TDRKHQ9Y2W6 561 aaKnown RBP9.16□□□□□ -0.94
MSH4-201ENST00000263187 VWA7Q9Y334 891 aa9.16□□□□□ -0.94
MSH4-201ENST00000263187 E9PAM4 449 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 MATN3O15232 486 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 LTA4HP09960 611 aaKnown RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 GFAPP14136 432 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PAMP19021 973 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 OXTRP30559 389 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 GRK4P32298 578 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 LHX1P48742 406 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 SLC5A3P53794 718 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 DIO3P55073 304 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PLCL1Q15111 1095 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 TBCELQ5QJ74 424 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 AGAP9Q5VTM2 703 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PM20D1Q6GTS8 502 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 KLC3Q6P597 504 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 CYHR1Q6ZMK1 362 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 LPCAT2Q7L5N7 544 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 PLEKHH3Q7Z736 793 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 SETD3Q86TU7 594 aaPredicted RBP9.15□□□□□ -0.94
MSH4-201ENST00000263187 FUNDC1Q8IVP5 155 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 OR13C4Q8NGS5 318 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 HSPBAP1Q96EW2 488 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 FBXL20Q96IG2 436 aa9.15□□□□□ -0.94
MSH4-201ENST00000263187 VAT1Q99536 393 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms