RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 HTRA2O43464 458 aaPredicted RBP27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 FZD6O60353 706 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 PGLSO95336 258 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 IL1BP01584 269 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 RPS6KA3P51812 740 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 MRPS21P82921 87 aaKnown RBP27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 CDK16Q00536 496 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 CAV1Q03135 178 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 RAD51Q06609 339 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 CCDC38Q502W7 563 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 RALGPS1Q5JS13 557 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 LRRC8BQ6P9F7 803 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 RUBCNQ92622 972 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 PPP1R2P1Q96PQ5 205 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 A8MX80 341 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 SYNCRIPO60506 623 aaKnown RBP27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 ALPIP09923 528 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 MAPK8P45983 427 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 PSMD8P48556 350 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 ACTN3Q08043 901 aaPredicted RBP27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 PDIA2Q13087 525 aaKnown RBP27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 CAMK2GQ13555 558 aaPredicted RBP27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 FBXO43Q4G163 708 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 ARMC12Q5T9G4 340 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 SDE2Q6IQ49 451 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 PIP4K2CQ8TBX8 421 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 SHDQ96IW2 340 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 TUBGCP5Q96RT8 1024 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 SAYSD1Q9NPB0 183 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 SYBUQ9NX95 663 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 PPM1HQ9ULR3 514 aa27.64■■■□□ 2.02
SMARCD3-201ENST00000262188 NDST3O95803 873 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 GCKP35557 465 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 MAGEA3P43357 314 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 ARL4CP56559 192 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 POU6F1Q14863 301 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 PIH1D2Q8WWB5 315 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 UHRF1Q96T88 793 aaPredicted RBP27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 MKRN2Q9H000 416 aaKnown RBP27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 MTRF1LQ9UGC7 380 aaKnown RBP27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 SPO11Q9Y5K1 396 aa27.64■■■□□ 2.01
SMARCD3-201ENST00000262188 CDH17Q12864 832 aa27.63■■■□□ 2.01
SMARCD3-201ENST00000262188 SLC14A2Q15849 920 aa27.63■■■□□ 2.01
SMARCD3-201ENST00000262188 QPCTQ16769 361 aa27.63■■■□□ 2.01
SMARCD3-201ENST00000262188 LINC00523Q86TU6 105 aa27.63■■■□□ 2.01
SMARCD3-201ENST00000262188 GOLGA8KD6RF30 607 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 SOCS5O75159 536 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 COPAP53621 1224 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 TRIM67Q6ZTA4 783 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 PDIK1LQ8N165 341 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 KCNV2Q8TDN2 545 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 AENQ8WTP8 325 aaKnown RBP27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 ARRDC3Q96B67 414 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 ECHDC3Q96DC8 303 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 RSRC1Q96IZ7 334 aaKnown RBP27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 SH3GL2Q99962 352 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 XAB2Q9HCS7 855 aaKnown RBP27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 CHMP2BQ9UQN3 213 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 MRPS17Q9Y2R5 130 aaKnown RBP27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 NPC1O15118 1278 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 EPHB1P54762 984 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 CAPN12Q6ZSI9 719 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 ZBED8Q8IZ13 594 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 SIGLEC10Q96LC7 697 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 C9orf72Q96LT7 481 aa27.62■■■□□ 2.01
SMARCD3-201ENST00000262188 AURKAO14965 403 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 SLC4A1P02730 911 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 ELK3P41970 407 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 ABL2P42684 1182 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 MSLNQ13421 630 aaPredicted RBP27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 CFAP58Q5T655 872 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 CES3Q6UWW8 571 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 PARS2Q7L3T8 475 aaKnown RBP27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 DRAXINQ8NBI3 349 aaPredicted RBP27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 BLOC1S5Q8TDH9 187 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 ZNF641Q96N77 438 aaPredicted RBP27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 MAD1L1Q9Y6D9 718 aa27.61■■■□□ 2.01
SMARCD3-201ENST00000262188 ANKRD66B4E2M5 251 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 BUD23O43709 281 aaKnown RBP27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 EPOP01588 193 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 DCNP07585 359 aaKnown RBP27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 STARD3Q14849 445 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 SMAD1Q15797 465 aaKnown RBP27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 TRMT11Q7Z4G4 463 aaKnown RBP27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 ARNT2Q9HBZ2 717 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 MMP17Q9ULZ9 603 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 ARIH1Q9Y4X5 557 aaPredicted RBP27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 C16orf96A6NNT2 1141 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 SMAPO00193 183 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 NDC80O14777 642 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 MID1O15344 667 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 PRNPP04156 253 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 HLA-DPA1P20036 260 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 ZNF805Q5CZA5 627 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 CASC4Q6P4E1 433 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 CENPUQ71F23 418 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 PJA1Q8NG27 643 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 ZNF778Q96MU6 729 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 ADGRE3Q9BY15 652 aa27.6■■■□□ 2.01
SMARCD3-201ENST00000262188 RSPH9Q9H1X1 276 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms