RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 IKBKGQ9Y6K9 419 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 CACNA1IQ9P0X4 2223 aa17.58■□□□□ 0.4
SRSF1-201ENST00000258962 IQANK1A0A1B0GTG1 560 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CCDC78A2IDD5 438 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 SRRM3A6NNA2 597 aaPredicted RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 TULP3O75386 442 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 KAT7O95251 611 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 SERPINF2P08697 491 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 GRIA2P42262 883 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CXCL12P48061 93 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CCR3P51677 355 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 NAB1Q13506 487 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 INO80DQ53TQ3 878 aaPredicted RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 MAMSTRQ6ZN01 415 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 Q6ZS52 159 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 RASSF3Q86WH2 238 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 C12orf40Q86WS4 652 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 PPHLN1Q8NEY8 458 aaKnown RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 PTCD2Q8WV60 388 aaKnown RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 ATOH1Q92858 354 aaPredicted RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 NUDCD1Q96RS6 583 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 PPANQ9NQ55 473 aaKnown RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CACNA1HO95180 2353 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 HMX2A2RU54 273 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 TBC1D3BA6NDS4 549 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 INSIG1O15503 277 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 MT-CO1P00395 513 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 ADRA1DP25100 572 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 SERPINH1P50454 418 aaKnown RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 PLK1P53350 603 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CSTF1Q05048 431 aaKnown RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 KDSRQ06136 332 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CDK18Q07002 472 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 PLEKHG6Q3KR16 790 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 GRAMD4Q6IC98 578 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 ETFBKMTQ8IXQ9 262 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CNPY4Q8N129 248 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 C4orf33Q8N1A6 199 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 CDKL2Q92772 493 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 SERAC1Q96JX3 654 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 RANBP9Q96S59 729 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 C2orf49Q9BVC5 232 aaPredicted RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 SCUBE2Q9NQ36 999 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 FBXO4Q9UKT5 387 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 FCF1Q9Y324 198 aaKnown RBP17.57■□□□□ 0.4
SRSF1-201ENST00000258962 PSAT1Q9Y617 370 aa17.57■□□□□ 0.4
SRSF1-201ENST00000258962 K7ERQ8 282 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 SPAG7O75391 227 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 EPOP01588 193 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 HLA-FP30511 346 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 SCNN1BP51168 640 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 BMPR2Q13873 1038 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 ARMC3Q5W041 872 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 PACS1Q6VY07 963 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 IFT43Q96FT9 208 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 KCNK9Q9NPC2 374 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 TREX1Q9NSU2 369 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 ABCB8Q9NUT2 735 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 SLC2A6Q9UGQ3 507 aa17.56■□□□□ 0.4
SRSF1-201ENST00000258962 TRIM49D1C9J1S8 452 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 PRPF4O43172 522 aaKnown RBP eCLIP17.55■□□□□ 0.42e-8■■■□□ 16.4
SRSF1-201ENST00000258962 TYROBPO43914 113 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 FGF1P05230 155 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SNRPAP09012 282 aaKnown RBP17.55■□□□□ 0.4
SRSF1-201ENST00000258962 KRT4P19013 534 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 HLA-DPA1P20036 260 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 ARNTP27540 789 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 LSP1P33241 339 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 TNFRSF4P43489 277 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 DGKGP49619 791 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SERPINB9P50453 376 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SLC12A1Q13621 1099 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SEPT6Q14141 434 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 GAS6Q14393 721 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 GALNT3Q14435 633 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 PITRM1Q5JRX3 1037 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 TEDDM1Q5T9Z0 273 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 ESRP1Q6NXG1 681 aaKnown RBP17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SH2D5Q6ZV89 423 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 KCNMB4Q86W47 210 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 ACDQ96AP0 544 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 CENPTQ96BT3 561 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SMC6Q96SB8 1091 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 KLF6Q99612 283 aaPredicted RBP17.55■□□□□ 0.4
SRSF1-201ENST00000258962 TDRD1Q9BXT4 1180 aaKnown RBP17.55■□□□□ 0.4
SRSF1-201ENST00000258962 SSU72Q9NP77 194 aaKnown RBP17.55■□□□□ 0.4
SRSF1-201ENST00000258962 C20orf96Q9NUD7 363 aaPredicted RBP17.55■□□□□ 0.4
SRSF1-201ENST00000258962 ZFATQ9P243 1243 aa17.55■□□□□ 0.4
SRSF1-201ENST00000258962 ATG2BQ96BY7 2078 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 HEATR9A2RTY3 570 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 K7EQS6 105 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 SMAD6O43541 496 aaKnown RBP17.54■□□□□ 0.4
SRSF1-201ENST00000258962 KRT37O76014 449 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 NDST3O95803 873 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 PRLP01236 227 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 MT-ND3P03897 115 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 CES1P23141 567 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 ARCN1P48444 511 aaKnown RBP17.54■□□□□ 0.4
SRSF1-201ENST00000258962 SEC13P55735 322 aa17.54■□□□□ 0.4
SRSF1-201ENST00000258962 RHOAP61586 193 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms