RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 LRCH4O75427 683 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 PRKCGP05129 697 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 PCCBP05166 539 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 MYBL1P10243 752 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 SCNN1BP51168 640 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 UCNP55089 124 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 CXADRP78310 365 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 SPIDRQ14159 915 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 OR6C4Q8NGE1 309 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 KCNE4Q8WWG9 221 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 SLC39A7Q92504 469 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 ZNF653Q96CK0 615 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 SLC46A1Q96NT5 459 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 DPH1Q9BZG8 443 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 TRIM7Q9C029 511 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 ASCL3Q9NQ33 180 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 CWC15Q9P013 229 aaKnown RBP21.18■□□□□ 0.98
NEDD8-201ENST00000250495 SEPT3Q9UH03 358 aa21.18■□□□□ 0.98
NEDD8-201ENST00000250495 CACNB4O00305 520 aaPredicted RBP21.17■□□□□ 0.98
NEDD8-201ENST00000250495 DDX3XO00571 662 aaKnown RBP eCLIP21.17■□□□□ 0.981e-12■■□□□ 12.1
NEDD8-201ENST00000250495 RECQL5O94762 991 aaPredicted RBP21.17■□□□□ 0.98
NEDD8-201ENST00000250495 CELA2BP08218 269 aaPredicted RBP21.17■□□□□ 0.98
NEDD8-201ENST00000250495 ELFN1P0C7U0 828 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 PCK1P35558 622 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 AP1S1P61966 158 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 BOLA3Q53S33 107 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 LIPIQ6XZB0 460 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 CYP4V2Q6ZWL3 525 aaPredicted RBP21.17■□□□□ 0.98
NEDD8-201ENST00000250495 NPWQ8N729 165 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 WDR36Q8NI36 951 aaKnown RBP21.17■□□□□ 0.98
NEDD8-201ENST00000250495 PCDH19Q8TAB3 1148 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 ZNF599Q96NL3 588 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 PSKH2Q96QS6 385 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 MYO1AQ9UBC5 1043 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 GPR34Q9UPC5 381 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 DGKBQ9Y6T7 804 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 ANKRD36A6QL64 1941 aa21.17■□□□□ 0.98
NEDD8-201ENST00000250495 A0A1B0GTH6 734 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.16■□□□□ 0.98
NEDD8-201ENST00000250495 A0A1W2PQ67 120 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 H3BRJ5 948 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 HOXC4P09017 264 aaPredicted RBP21.16■□□□□ 0.98
NEDD8-201ENST00000250495 KELP23276 732 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 ARL4AP40617 200 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 ZNF165P49910 485 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 TMPRSS3P57727 454 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 DPYSQ14117 519 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 LBRQ14739 615 aaKnown RBP21.16■□□□□ 0.98
NEDD8-201ENST00000250495 TMCO4Q5TGY1 634 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 ARHGAP36Q6ZRI8 547 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 DPPA4Q7L190 304 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 ARL14Q8N4G2 192 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 CCDC97Q96F63 343 aaPredicted RBP21.16■□□□□ 0.98
NEDD8-201ENST00000250495 NAP1L5Q96NT1 182 aaPredicted RBP21.16■□□□□ 0.98
NEDD8-201ENST00000250495 ISCUQ9H1K1 167 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 SYNDIG1Q9H7V2 258 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 SIRPGQ9P1W8 387 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 LOC400499M0QZD8 3231 aa21.16■□□□□ 0.98
NEDD8-201ENST00000250495 TMX2-CTNND1H3BSU7 103 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 NTN3O00634 580 aaPredicted RBP21.15■□□□□ 0.98
NEDD8-201ENST00000250495 TRAFD1O14545 582 aaPredicted RBP21.15■□□□□ 0.98
NEDD8-201ENST00000250495 KLK10O43240 276 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 SKILP12757 684 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 MLLT3P42568 568 aaPredicted RBP21.15■□□□□ 0.98
NEDD8-201ENST00000250495 KIAA1024LP59773 190 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 C19orf57Q0VDD7 668 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 RALGDSQ12967 914 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 NR1I3Q14994 352 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 E4F1Q66K89 784 aaPredicted RBP21.15■□□□□ 0.98
NEDD8-201ENST00000250495 PLA2G15Q8NCC3 412 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 OR56A4Q8NGH8 313 aa21.15■□□□□ 0.98
NEDD8-201ENST00000250495 RBM15Q96T37 977 aaKnown RBP eCLIP21.15■□□□□ 0.988e-6■□□□□ 8.4
NEDD8-201ENST00000250495 SMG1Q96Q15 3661 aaKnown RBP21.15■□□□□ 0.98
NEDD8-201ENST00000250495 COL27A1Q8IZC6 1860 aaPredicted RBP21.15■□□□□ 0.98
NEDD8-201ENST00000250495 CCDC187A0A096LP49 1063 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 A0A1W2PNU3 283 aaPredicted RBP21.14■□□□□ 0.97
NEDD8-201ENST00000250495 TNFRSF10CO14798 259 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 SERPINC1P01008 464 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 PTMSP20962 102 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 NFKBIAP25963 317 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 TRIM23P36406 574 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 HSPA9P38646 679 aaKnown RBP21.14■□□□□ 0.97
NEDD8-201ENST00000250495 SLC10A7Q0GE19 358 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 ZNF235Q14590 738 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 TCEA2Q15560 299 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 DPYSL2Q16555 572 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 FOXR1Q6PIV2 292 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 BBS5Q8N3I7 341 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 KYQ8NBH2 561 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 FUBP1Q96AE4 644 aaKnown RBP21.14■□□□□ 0.97
NEDD8-201ENST00000250495 PRR11Q96HE9 360 aaPredicted RBP21.14■□□□□ 0.97
NEDD8-201ENST00000250495 KCTD5Q9NXV2 234 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 KIF26BQ2KJY2 2108 aa21.14■□□□□ 0.97
NEDD8-201ENST00000250495 TMEM202A6NGA9 273 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 PDE2AO00408 941 aaPredicted RBP21.13■□□□□ 0.97
NEDD8-201ENST00000250495 AMPD1P23109 780 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 PIGHQ14442 188 aaPredicted RBP21.13■□□□□ 0.97
NEDD8-201ENST00000250495 ACOX1Q15067 660 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 FIGNQ5HY92 759 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 TMCO3Q6UWJ1 677 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms