RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 CDH17Q12864 832 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 RALGDSQ12967 914 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 FASTKD3Q14CZ7 662 aaKnown RBP20.23■□□□□ 0.83
SNRPA-201ENST00000243563 CCDC38Q502W7 563 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 HP1BP3Q5SSJ5 553 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-201ENST00000243563 LINC00523Q86TU6 105 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 TTC7BQ86TV6 843 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 FAM124AQ86V42 546 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 RASSF3Q86WH2 238 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 IGDCC3Q8IVU1 814 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 IFT20Q8IY31 132 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 MAML2Q8IZL2 1156 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-201ENST00000243563 DNAAF3Q8N9W5 541 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 BBOF1Q8ND07 529 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 HCAR2Q8TDS4 363 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 FAM131CQ96AQ9 280 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 EID2BQ96D98 161 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 ADGRE3Q9BY15 652 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 SPATA6Q9NWH7 488 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-201ENST00000243563 SYBUQ9NX95 663 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 FBXL12Q9NXK8 326 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 KCTD3Q9Y597 815 aa20.23■□□□□ 0.83
SNRPA-201ENST00000243563 ZNF106Q9H2Y7 1883 aaKnown RBP20.23■□□□□ 0.83
SNRPA-201ENST00000243563 BPTFQ12830 3046 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 CAPN8A6NHC0 703 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 AREL1O15033 823 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 FAM153BP0C7A2 387 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 CXCL12P48061 93 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 TPMTP51580 245 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 NEK3P51956 506 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 RPL26P61254 145 aaKnown RBP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 DHX9Q08211 1270 aaKnown RBP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 HLTFQ14527 1009 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 PTPRCAPQ14761 206 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 POU6F1Q14863 301 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 FAM153CQ494X1 144 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 UBAP2Q5T6F2 1119 aaKnown RBP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 PGBD3Q8N328 593 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 ZCCHC9Q8N567 271 aaKnown RBP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 BLOC1S5Q8TDH9 187 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 PPP1R16AQ96I34 528 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 BCCIPQ9P287 314 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 RPL26L1Q9UNX3 145 aaKnown RBP20.22■□□□□ 0.83
SNRPA-201ENST00000243563 PLXNA2O75051 1894 aa20.22■□□□□ 0.83
SNRPA-201ENST00000243563 CCDC78A2IDD5 438 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 BUD23O43709 281 aaKnown RBP20.21■□□□□ 0.83
SNRPA-201ENST00000243563 MMP12P39900 470 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 MAGEA9P43362 315 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 FBXL19Q6PCT2 694 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 CRTC1Q6UUV9 634 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 LYSMD3Q7Z3D4 306 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 FBXL6Q8N531 539 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 RLN3Q8WXF3 142 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 SCRN2Q96FV2 425 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 SIGLEC10Q96LC7 697 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 PARD6BQ9BYG5 372 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 XAB2Q9HCS7 855 aaKnown RBP20.21■□□□□ 0.83
SNRPA-201ENST00000243563 DYRK4Q9NR20 520 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 USP36Q9P275 1121 aaKnown RBP20.21■□□□□ 0.83
SNRPA-201ENST00000243563 FADS3Q9Y5Q0 445 aa20.21■□□□□ 0.83
SNRPA-201ENST00000243563 APBB3O95704 486 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 SLC4A1P02730 911 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 TDGF1P13385 188 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 FAM193AP78312 1265 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 CUL1Q13616 776 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 BBS9Q3SYG4 887 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 MAMSTRQ6ZN01 415 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 RFLNAQ6ZTI6 216 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 BMP8AQ7Z5Y6 402 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 TTC30BQ8N4P2 665 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 FAM160A2Q8N612 972 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-201ENST00000243563 MYRIPQ8NFW9 859 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 GANCQ8TET4 914 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 ZNF778Q96MU6 729 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 OMDQ99983 421 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 IER2Q9BTL4 223 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 PRMT8Q9NR22 394 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-201ENST00000243563 ZNF711Q9Y462 761 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 ARL5AQ9Y689 179 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 CEP192Q8TEP8 1941 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 GOLGA8CPA6NN73 597 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 CTIFO43310 598 aaKnown RBP20.2■□□□□ 0.82
SNRPA-201ENST00000243563 PAPSS2O95340 614 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-201ENST00000243563 CLDN7O95471 211 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 MLNP12872 115 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 GM2AP17900 193 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 TNFRSF8P28908 595 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 CCR3P51677 355 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 TUBB4BP68371 445 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 ZBTB16Q05516 673 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 HIF1AQ16665 826 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 DPPA4Q7L190 304 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 WRAP53Q9BUR4 548 aaKnown RBP20.2■□□□□ 0.82
SNRPA-201ENST00000243563 PLAC1Q9HBJ0 212 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 ITM2CQ9NQX7 267 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 CYP8B1Q9UNU6 501 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 INVSQ9Y283 1065 aa20.2■□□□□ 0.82
SNRPA-201ENST00000243563 A0A1W2PQ67 120 aa20.19■□□□□ 0.82
SNRPA-201ENST00000243563 E7ESA3 106 aa20.19■□□□□ 0.82
SNRPA-201ENST00000243563 LDB2O43679 373 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms