RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 KRR1Q13601 381 aaKnown RBP11.06□□□□□ -0.64
CCDC170-201ENST00000239374 CEACAM7Q14002 265 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 IKBKEQ14164 716 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 MAPRE1Q15691 268 aaKnown RBP11.06□□□□□ -0.64
CCDC170-201ENST00000239374 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 UGT3A1Q6NUS8 523 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 ANKLE1Q8NAG6 615 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 C12orf43Q96C57 262 aaKnown RBP11.06□□□□□ -0.64
CCDC170-201ENST00000239374 PPP1R14BQ96C90 147 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 MUC3BQ9H195 1237 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 RERGLQ9H628 205 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 RMI1Q9H9A7 625 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
CCDC170-201ENST00000239374 CCL22O00626 93 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 RNASEH2AO75792 299 aaKnown RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 RXRBP28702 533 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 LIPEQ05469 1076 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 SH3D19Q5HYK7 790 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 OGFRL1Q5TC84 451 aaPredicted RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 FAM45BPQ6NSW5 357 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 TMEM214Q6NUQ4 689 aaKnown RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 RIOX2Q8IUF8 465 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 FAM45AQ8TCE6 357 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 APOL4Q9BPW4 351 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 RMND5AQ9H871 391 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 MKS1Q9NXB0 559 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 OAZ3Q9UMX2 235 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 TIMM22Q9Y584 194 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 U3KQV3 271 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 MED26O95402 600 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 GRM5P41594 1212 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 MBTD1Q05BQ5 628 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 CARTPTQ16568 116 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 GLYATQ6IB77 296 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 OR9I1Q8NGQ6 314 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 ARMC7Q9H6L4 198 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 TMEM161AQ9NX61 479 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 LOC100506127A0A0U1RQW1 187 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 A0A1W2PPW3 197 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 NPHS1O60500 1241 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 RAMP2O60895 175 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 CNOT3O75175 753 aaKnown RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 SEC22BO75396 215 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 ENDOD1O94919 500 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 SOX6P35712 828 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 NDUFV1P49821 464 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 GNA12Q03113 381 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 DEPDC1Q5TB30 811 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 HECTD2Q5U5R9 776 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 OLFML1Q6UWY5 402 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 CPSF7Q8N684 471 aaKnown RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 SEPT5Q99719 369 aaPredicted RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 NXF3Q9H4D5 531 aaKnown RBP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 MROH8Q9H579 483 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 SNX10Q9Y5X0 201 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 SLC22A3O75751 556 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 CLIC3O95833 236 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 TFPTP0C1Z6 253 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 C9orf57Q5W0N0 161 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 GCNT7Q6ZNI0 430 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 KBTBD6Q86V97 674 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 GPSM1Q86YR5 675 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 TWIST2Q8WVJ9 160 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 COLEC11Q9BWP8 271 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 FZD8Q9H461 694 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC170-201ENST00000239374 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 FZD10Q9ULW2 581 aa11.05□□□□□ -0.64
CCDC170-201ENST00000239374 MAGP20916 626 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CAPGP40121 348 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 ADCYAP1R1P41586 468 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 TOP3AQ13472 1001 aaPredicted RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 DDR2Q16832 855 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 THAP5Q7Z6K1 395 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 MILR1Q7Z6M3 343 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 UTP15Q8TED0 518 aaKnown RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 ALG2Q9H553 416 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 ACTR8Q9H981 624 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CATSPERZQ9NTU4 200 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CDH9Q9ULB4 789 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 PRG3Q9Y2Y8 225 aaPredicted RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CAB39Q9Y376 341 aaPredicted RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 TELO2Q9Y4R8 837 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 TRIM43BA6NCK2 446 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 DPYSL4O14531 572 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 DENRO43583 198 aaKnown RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CPSF4O95639 269 aaKnown RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 HOXB8P17481 243 aaPredicted RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 TKTP29401 623 aaKnown RBP11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CCNYL2Q5T2Q4 361 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 CCDC80Q76M96 950 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 BCO2Q9BYV7 579 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 MOCS1Q9NZB8 636 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
CCDC170-201ENST00000239374 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms