RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TFEBP19484 476 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 MTHFRP42898 656 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 CCR3P51677 355 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 AIF1P55008 147 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 VBP1P61758 197 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 POLR1EQ9GZS1 481 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 PCDHGA3Q9Y5H0 932 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 A0A0U1RQJ8 604 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 RBM48Q5RL73 367 aaKnown RBP8.25□□□□□ -1.09
APOB-201ENST00000233242 OVOS1Q6IE37 1185 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 KLHDC10Q6PID8 442 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 KCTD8Q6ZWB6 473 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 FAM136AQ96C01 138 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 IGSF9Q9P2J2 1179 aa8.25□□□□□ -1.09
APOB-201ENST00000233242 KCNK1O00180 336 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 SLITRK3O94933 977 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 METTL18O95568 372 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ASLP04424 464 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 S100GP29377 79 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ELAVL2Q12926 359 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 ACAP2Q15057 778 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 LSM12Q3MHD2 195 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 MGAT5BQ3V5L5 792 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CES3Q6UWW8 571 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 C1orf186Q6ZWK4 172 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 MTSS1LQ765P7 747 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TXNRD3Q86VQ6 643 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 USP7Q93009 1102 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 NLNQ9BYT8 704 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 PIDD1Q9HB75 910 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TCRBV5S4A2TA0A5A2 114 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CASKO14936 926 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 MARCKSL1P49006 195 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 NDST1P52848 882 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 GLT6D1Q7Z4J2 308 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CHPFQ8IZ52 775 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ENDOVQ8N8Q3 282 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 FAM124BQ9H5Z6 455 aaPredicted RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 TAS2R7Q9NYW3 318 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 DHRS7Q9Y394 339 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 PTPN3P26045 913 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 SLC7A1P30825 629 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 PTCHD4Q6ZW05 846 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 UCMAQ8WVF2 138 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TSPAN4O14817 238 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 NTSR2O95665 410 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.091e-49■□□□□ 10.8
APOB-201ENST00000233242 FMO1Q01740 532 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 MED22Q15528 200 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ISLR2Q6UXK2 745 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 MED11Q9P086 117 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 KLQ9UEF7 1012 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 POMPQ9Y244 141 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 AXIN2Q9Y2T1 843 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 DGKBQ9Y6T7 804 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TRIM64CA6NLI5 447 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ARP10275 920 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 FECHP22830 423 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 LAMTOR4Q0VGL1 99 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 EPHB6O15197 1021 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 IPO13O94829 963 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 RPLP0P05388 317 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 NR4A1P22736 598 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CTSKP43235 329 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 PLEKHG6Q3KR16 790 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TRPV3Q8NET8 790 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 FNDC11Q9BVV2 318 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 FAIM2Q9BWQ8 316 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 UNKQ9C0B0 810 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 XPR1Q9UBH6 696 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 LYPLA1O75608 230 aaPredicted RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 OR2B6P58173 313 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 MPP1Q00013 466 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 SPIBQ01892 262 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 MED8Q96G25 268 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TLR8Q9NR97 1041 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 PCDHB12Q9Y5F1 795 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ZC3H13Q5T200 1668 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 LMTK2Q8IWU2 1503 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 AQP12BA6NM10 295 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ACKR2O00590 384 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 SLC6A2P23975 617 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 ACADLP28330 430 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 HOXD10P28358 340 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CPT1AP50416 773 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 PCBP1Q15365 356 aaKnown RBP eCLIP8.24□□□□□ -1.09
APOB-201ENST00000233242 SLC1A5Q15758 541 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 DRICH1Q6PGQ1 229 aaPredicted RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 AQP12AQ8IXF9 295 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 BANPQ8N9N5 519 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 INTS10Q9NVR2 710 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 RBMX2Q9Y388 322 aaKnown RBP8.24□□□□□ -1.09
APOB-201ENST00000233242 ITSN1Q15811 1721 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CYP3A7-CYP3A51PA0A087WV96 503 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 TEX28O15482 410 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 PEX11AO75192 247 aa8.24□□□□□ -1.09
APOB-201ENST00000233242 CYP3A7P24462 503 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms