RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TOP1MTQ969P6 601 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 HDAC10Q969S8 669 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 TSC22D3Q99576 134 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 TRMT13Q9NUP7 481 aaKnown RBP22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 MARCH2Q9P0N8 246 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 NEMP2A6NFY4 417 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 LDB2O43679 373 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 FESP07332 822 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 CD1EP15812 388 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 XRCC1P18887 633 aaPredicted RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 AQP4P55087 323 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 IRX1P78414 480 aaPredicted RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 MRPL58Q14197 206 aaKnown RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 CTXN3Q4LDR2 81 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 RARS2Q5T160 578 aaKnown RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 PTAR1Q7Z6K3 402 aaPredicted RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 SAPCD2Q86UD0 394 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 RNF135Q8IUD6 432 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 ST13P4Q8IZP2 240 aaPredicted RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 POLR1EQ9GZS1 481 aaKnown RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 SARDHQ9UL12 918 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 UTRNP46939 3433 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 MOXD2PA6NHM9 499 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 UBDO15205 165 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 CFLARO15519 480 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 PRAMEF11O60813 436 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 SMIM24O75264 130 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 FDXRP22570 491 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 GRK4P32298 578 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 TRIM32Q13049 653 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 ADGRE1Q14246 886 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 RAP1GAP2Q684P5 730 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 ZNF280DQ6N043 979 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 ZNF354CQ86Y25 554 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 PGBD5Q8N414 524 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 ADCY4Q8NFM4 1077 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 SPATA17Q96L03 361 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 LRGUKQ96M69 825 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 TUBGCP5Q96RT8 1024 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 UNKQ9C0B0 810 aaKnown RBP22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 GSTO2Q9H4Y5 243 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 Q9H521 79 aa22.06■■□□□ 1.12
SMARCD2-201ENST00000225742 RNASEH1O60930 286 aaKnown RBP22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 GLP2RO95838 553 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 KCNA5P22460 613 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 SMARCB1Q12824 385 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 PTK2BQ14289 1009 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 GRM2Q14416 872 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 MMEL1Q495T6 779 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 MRNIPQ6NTE8 343 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 CYP4F12Q9HCS2 524 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 TRAF6Q9Y4K3 522 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 MRPL42Q9Y6G3 142 aaKnown RBP22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 TTC3P53804 2025 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 CASP8AP2Q9UKL3 1982 aa22.05■■□□□ 1.12
SMARCD2-201ENST00000225742 DENRO43583 198 aaKnown RBP22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 GPC4O75487 556 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 MYCNP04198 464 aaPredicted RBP22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 CAPNS1P04632 268 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 CKBP12277 381 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 OGNP20774 298 aaKnown RBP22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 SUOXP51687 545 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 ARSDP51689 593 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 CDKN2DP55273 166 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 PSME3P61289 254 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 IHHQ14623 411 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 LRRC36Q1X8D7 754 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 GRAMD1BQ3KR37 738 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 C10orf120Q5SQS8 335 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 HACD2Q6Y1H2 254 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 ANKRD49Q8WVL7 239 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 MARK4Q96L34 752 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 RPRD1AQ96P16 312 aaPredicted RBP22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 ARHGAP39Q9C0H5 1083 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 UNC93B1Q9H1C4 597 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 EPS15L1Q9UBC2 864 aa22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 SUCOQ9UBS9 1254 aaKnown RBP22.04■■□□□ 1.12
SMARCD2-201ENST00000225742 SLC12A8A0AV02 714 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 PSMD12O00232 456 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 AP1G1O43747 822 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 RPP40O75818 363 aaKnown RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 CCND3P30281 292 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 TM4SF4P48230 202 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 C5orf22Q49AR2 442 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 ZNF678Q5SXM1 525 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 RNF220Q5VTB9 566 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 ALG1LQ6GMV1 187 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 ISCA2Q86U28 154 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 BRSK1Q8TDC3 778 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 NPAS2Q99743 824 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 SEMA3CQ99985 751 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 PRG3Q9Y2Y8 225 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 ACOT8O14734 319 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 CD3EAPO15446 510 aaKnown RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 CCNHP51946 323 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 PKNOX1P55347 436 aa22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 TRAP1Q12931 704 aaKnown RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 FASTKQ14296 549 aaKnown RBP22.03■■□□□ 1.12
SMARCD2-201ENST00000225742 ZNF235Q14590 738 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms