RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 NUF2Q9BZD4 464 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 RAB26Q9ULW5 256 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 SHROOM3Q8TF72 1996 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 ENO4A6NNW6 628 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 ZMPSTE24O75844 475 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 SOD2P04179 222 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 RBP1P09455 135 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 ARNTP27540 789 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC26A3P40879 764 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 ART3Q13508 389 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 FAM83EQ2M2I3 478 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 CWF19L1Q69YN2 538 aaKnown RBP25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 ESRP1Q6NXG1 681 aaKnown RBP25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 MARVELD2Q8N4S9 558 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 SPATA22Q8NHS9 363 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 PHOSPHO2Q8TCD6 241 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 NCSTNQ92542 709 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 NXNL1Q96CM4 212 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 C1orf74Q96LT6 269 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 CDRT15Q96T59 188 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 HERC2P3Q9BVR0 1158 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC39A8Q9C0K1 460 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 EPB41L1Q9H4G0 881 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 ABI2Q9NYB9 513 aaPredicted RBP25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 FBXO5Q9UKT4 447 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 PTPRDP23468 1912 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 HEATR9A2RTY3 570 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 PAGE1O75459 146 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 BCAS2O75934 225 aaPredicted RBP25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 CPB1P15086 417 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 AQP4P55087 323 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 FLOT2Q14254 428 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 POU6F1Q14863 301 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC14A2Q15849 920 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 LIN52Q52LA3 116 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 AGAP9Q5VTM2 703 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 FOXB2Q5VYV0 432 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 BTBD8Q5XKL5 378 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 RTL3Q8N8U3 475 aaKnown RBP25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 USP33Q8TEY7 942 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 FSD1LQ9BXM9 530 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC25A51Q9H1U9 297 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 MTIF3Q9H2K0 278 aaKnown RBP25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 WDR41Q9HAD4 459 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 OSER1Q9NX31 292 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 MTRRQ9UBK8 725 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 PCDHB5Q9Y5E4 795 aa25.05■■□□□ 1.6
RUNDC3A-201ENST00000225441 PATJQ8NI35 1801 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 GOLGA8TH3BQL2 631 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 SORBS2O94875 1100 aaKnown RBP25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 PPM1AP35813 382 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 CHN2P52757 468 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 ARPP19P56211 112 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 NEPROQ6NW34 567 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 CHSY3Q70JA7 882 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 PHC3Q8NDX5 983 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 ELMO2Q96JJ3 720 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 LRGUKQ96M69 825 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 TRMOQ9BU70 441 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 VPS45Q9NRW7 570 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 RBM22Q9NW64 420 aaKnown RBP eCLIP25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 MAGED2Q9UNF1 606 aaPredicted RBP25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 BACE2Q9Y5Z0 518 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 KIAA1671Q9BY89 1806 aa25.04■■□□□ 1.6
RUNDC3A-201ENST00000225441 NEMP1O14524 444 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 LINC00271P0C7V0 271 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 ZCCHC18P0CG32 403 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 SAT1P21673 171 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC1A2P43004 574 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 GLRBP48167 497 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 ERFP50548 548 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 MPP1Q00013 466 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 STX5Q13190 355 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 GPR17Q13304 367 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 TSTD2Q5T7W7 516 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 COL13A1Q5TAT6 717 aaPredicted RBP25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 KIAA1841Q6NSI8 718 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 KLC3Q6P597 504 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 DDX53Q86TM3 631 aaKnown RBP25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC22A9Q8IVM8 553 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 CEP97Q8IW35 865 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 DENND6AQ8IWF6 608 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 RCN3Q96D15 328 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 RAD9AQ99638 391 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 CNOT11Q9UKZ1 510 aaKnown RBP25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 NUP205Q92621 2012 aa25.03■■□□□ 1.6
RUNDC3A-201ENST00000225441 SMIM31A0A1B0GVY4 71 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 MT-CYBP00156 380 aaPredicted RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 PABPC4LP0CB38 370 aaKnown RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 GRIK1P39086 918 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 LEPRP48357 1165 aaKnown RBP25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 TAS2R39P59534 338 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 PFKPQ01813 784 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 CTBP1Q13363 440 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 PEX6Q13608 980 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 ADGRE1Q14246 886 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 PDK3Q15120 406 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 NXNQ6DKJ4 435 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 TRIM67Q6ZTA4 783 aa25.02■■□□□ 1.6
RUNDC3A-201ENST00000225441 PELI3Q8N2H9 469 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms