RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 MAGEB10Q96LZ2 347 aaPredicted RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 ZNHIT2Q9UHR6 403 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 MTF2Q9Y483 593 aaPredicted RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 BPGMP07738 259 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 CTPS1P17812 591 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 PPM1AP35813 382 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 KRR1Q13601 381 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 ANGPT1Q15389 498 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 POM121L1PQ3SYA9 428 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 FBXW8Q8N3Y1 598 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 ZNF276Q8N554 614 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 PTCD3Q96EY7 689 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 ZFRQ96KR1 1074 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 CEP44Q9C0F1 390 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 RAD21L1Q9H4I0 556 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 CAB39LQ9H9S4 337 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SPAG4Q9NPE6 437 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 ATAD3AQ9NVI7 634 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 TMEM216Q9P0N5 145 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 LGALS13Q9UHV8 139 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 TMCO1Q9UM00 188 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 BTRCQ9Y297 605 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 QSOX1O00391 747 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 TSPAN1O60635 241 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 LYPLA1O75608 230 aaPredicted RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 OTCP00480 354 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 NET1Q7Z628 596 aaPredicted RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 TRMOQ9BU70 441 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 ENTPD4Q9Y227 616 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 CHKBQ9Y259 395 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SGTAO43765 313 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 OR4Q2P0C623 313 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 TPSB2P20231 275 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 GPR1P46091 355 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 PPIDQ08752 370 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 UBAP2LQ14157 1087 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 TPSAB1Q15661 275 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 KRT73Q86Y46 540 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 ZCCHC7Q8N3Z6 543 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 MAGEE2Q8TD90 523 aaPredicted RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 TFAP2BQ92481 460 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 RNFT2Q96EX2 444 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 MRPL48Q96GC5 212 aaKnown RBP11.56□□□□□ -0.56
NOD1-201ENST00000222823 TEKT5Q96M29 485 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
NOD1-201ENST00000222823 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 DNM1LO00429 736 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 CLDN11O75508 207 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 KRT36O76013 467 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 PAICSP22234 425 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 FGFR3P22607 806 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 RPL38P63173 70 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 SMARCB1Q12824 385 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 PIGWQ7Z7B1 504 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 CXorf40AQ8TE69 158 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 DQX1Q8TE96 717 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 RCN3Q96D15 328 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 MAPRE3Q9UPY8 281 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 MFSD11O43934 449 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 IL1BP01584 269 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 GABRR2P28476 465 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 ECHS1P30084 290 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 MAPK9P45984 424 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 PTDSS1P48651 473 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 PRKAG1P54619 331 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 LILRA4P59901 499 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 ISLR2Q6UXK2 745 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 GCNT7Q6ZNI0 430 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 ANKRD23Q86SG2 305 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 CPNE8Q86YQ8 564 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 PNPOQ9NVS9 261 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 ZNF214Q9UL59 606 aaPredicted RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 KCNE2Q9Y6J6 123 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 LAMB2P55268 1798 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 A0A1W2PQH9 124 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 BCLAF3A2AJT9 711 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 MDM4O15151 490 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 CNPP09543 421 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 CXCR2P25025 360 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 CTNNB1P35222 781 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 TALDO1P37837 337 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 PTPN9P43378 593 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 POLD2P49005 469 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 HK2P52789 917 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 SKP1P63208 163 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 ARMCX4Q5H9R4 360 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 RAET1GQ6H3X3 334 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 CES5AQ6NT32 575 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 DRICH1Q6PGQ1 229 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms