RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 MSRAQ9UJ68 235 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 HDAC3O15379 428 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 AMD1P17707 334 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 QPCTQ16769 361 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 RNF44Q7L0R7 432 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 FBXW8Q8N3Y1 598 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 NIFKQ9BYG3 293 aaKnown RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 CHKBQ9Y259 395 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 POLR1DQ9Y2S0 133 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 MAFBQ9Y5Q3 323 aaPredicted RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 A0A087WXM4 84 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 ZNF37AP17032 561 aaPredicted RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 TLX1P31314 330 aaPredicted RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 TAF10Q12962 218 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 YTHDF3Q7Z739 585 aaKnown RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 TMEM139Q8IV31 216 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 RGL4Q8IZJ4 473 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 ZCCHC7Q8N3Z6 543 aaKnown RBP12.96□□□□□ -0.33
DDX17-201ENST00000216019 ZNF398Q8TD17 642 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 LRMDAQ9H2I8 198 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 RPS6KA6Q9UK32 745 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
DDX17-201ENST00000216019 C2orf71A6NGG8 1288 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 E9PAM4 449 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 ATP6V0D1P61421 351 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 DHDDSQ86SQ9 333 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 ADAMTSL2Q86TH1 951 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 CLYBLQ8N0X4 340 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 CCDC185Q8N715 623 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 UXS1Q8NBZ7 420 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 OR4A15Q8NGL6 344 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 PPP1R14AQ96A00 147 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.34
DDX17-201ENST00000216019 NPAS2Q99743 824 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 ADI1Q9BV57 179 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 ANGPT4Q9Y264 503 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.34
DDX17-201ENST00000216019 CHURC1-FNTBB4DL54 471 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 IDH2P48735 452 aaKnown RBP12.96□□□□□ -0.34
DDX17-201ENST00000216019 STX4Q12846 297 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 INTS11Q5TA45 600 aaKnown RBP12.96□□□□□ -0.34
DDX17-201ENST00000216019 PIWIL4Q7Z3Z4 852 aaKnown RBP12.96□□□□□ -0.34
DDX17-201ENST00000216019 CLIP3Q96DZ5 547 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 MYOCQ99972 504 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.34
DDX17-201ENST00000216019 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 OR6A2O95222 327 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CLCNKBP51801 687 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 NAA20P61599 178 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CPSF6Q16630 551 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX17-201ENST00000216019 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 SKA1Q96BD8 255 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 KIAA1522Q9P206 1035 aaPredicted RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 GGA2Q9UJY4 613 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 BCLAF3A2AJT9 711 aaKnown RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 ZW10O43264 779 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CD48P09326 243 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 RABGGTBP53611 331 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 SLC5A3P53794 718 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CDC42P60953 191 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 PTSQ03393 145 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CDC73Q6P1J9 531 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CUZD1Q86UP6 607 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 FAM20CQ8IXL6 584 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 OFCC1Q8IZS5 231 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 HLA-DQA2P01906 255 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CES1P23141 567 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 MPSTP25325 297 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 PPIDQ08752 370 aaKnown RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 RBFAQ8N0V3 343 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 C1orf127Q8N9H9 656 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 EPB41L4BQ9H329 900 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CCL16O15467 120 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 TLL1O43897 1013 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 MED26O95402 600 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 HECTD2Q5U5R9 776 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 POTEHQ6S545 545 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CLEC4DQ8WXI8 215 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 DEFB118Q96PH6 123 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CEP44Q9C0F1 390 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 SLC25A14O95258 325 aaPredicted RBP12.95□□□□□ -0.34
DDX17-201ENST00000216019 BPGMP07738 259 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 CDH13P55290 713 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 PDK3Q15120 406 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 ULK2Q8IYT8 1036 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 SLC47A1Q96FL8 570 aa12.95□□□□□ -0.34
DDX17-201ENST00000216019 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms