RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 RGMBQ6NW40 437 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 SLC24A5Q71RS6 500 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 SPNS2Q8IVW8 549 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 OR6P1Q8NGX9 317 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 L3HYPDHQ96EM0 354 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 NPAS2Q99743 824 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 MRPL1Q9BYD6 325 aaKnown RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 GSTO2Q9H4Y5 243 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 MARCH4Q9P2E8 410 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 RIMS3Q9UJD0 308 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 SARDHQ9UL12 918 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 STX16-NPEPL1H3BU86 382 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 DENRO43583 198 aaKnown RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 IGLV3-27P01718 113 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 PBX3P40426 434 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 KCNC1P48547 511 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 FLT3LGP49771 235 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 PRAMEP78395 509 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 MRPS22P82650 360 aaKnown RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 NFKB2Q00653 900 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 FOLH1Q04609 750 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 STX5Q13190 355 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 MAPRE2Q15555 327 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 PARP15Q460N3 678 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 TICAM1Q8IUC6 712 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 BHLHE22Q8NFJ8 381 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 PIP4K2CQ8TBX8 421 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 USP13Q92995 863 aaPredicted RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 ARHGAP39Q9C0H5 1083 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 OLA1Q9NTK5 396 aaKnown RBP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLDN11-201ENST00000064724 PCDHGA7Q9Y5G6 932 aa17.39■□□□□ 0.37
CLDN11-201ENST00000064724 PLXNA3P51805 1871 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PRSS51A0A1B0GVH4 220 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 CCDC189A1A4V9 331 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 CAPN8A6NHC0 703 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 ENO4A6NNW6 628 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 TRIM38O00635 465 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 SYN3O14994 580 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 UBDO15205 165 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 RAMP2O60895 175 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 TBX18O95935 607 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 HOXB8P17481 243 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 FCGRTP55899 365 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 YBEYP58557 167 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 POLD3Q15054 466 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 RARS2Q5T160 578 aaKnown RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 FAM45BPQ6NSW5 357 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 GK5Q6ZS86 529 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PNPLA1Q8N8W4 532 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 ADCY4Q8NFM4 1077 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 GPR150Q8NGU9 434 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 FAM45AQ8TCE6 357 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PHF21BQ96EK2 531 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PIDD1Q9HB75 910 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 MRPL40Q9NQ50 206 aaKnown RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 TRAF6Q9Y4K3 522 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PSMD12O00232 456 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 EPOP01588 193 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 YWHAQP27348 245 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 MSX2P35548 267 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PLK1P53350 603 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 LAMB3Q13751 1172 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 LRP8Q14114 963 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 PDK3Q15120 406 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 VARS2Q5ST30 1063 aaKnown RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 ZNF678Q5SXM1 525 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 GPR158Q5T848 1215 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 RAP1GAP2Q684P5 730 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 CYHR1Q6ZMK1 362 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 RPS27LQ71UM5 84 aaKnown RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 LDB1Q86U70 411 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 ST13P4Q8IZP2 240 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 ATAD1Q8NBU5 361 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 CATSPER1Q8NEC5 780 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 ZNF483Q8TF39 744 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-201ENST00000064724 DCUN1D1Q96GG9 259 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 FEM1CQ96JP0 617 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 LRGUKQ96M69 825 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 MARCH2Q9P0N8 246 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 KCTD3Q9Y597 815 aa17.38■□□□□ 0.37
CLDN11-201ENST00000064724 TTC24A2A3L6 582 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-201ENST00000064724 CCL22O00626 93 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 UBFD1O14562 309 aaKnown RBP17.37■□□□□ 0.37
CLDN11-201ENST00000064724 SLC10A3P09131 477 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 FDXRP22570 491 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 OR1G1P47890 313 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 PSME3P61289 254 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 MRPL58Q14197 206 aaKnown RBP17.37■□□□□ 0.37
CLDN11-201ENST00000064724 FBXL19Q6PCT2 694 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 UGT2A3Q6UWM9 527 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 SAPCD2Q86UD0 394 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 MARVELD2Q8N4S9 558 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 RNF148Q8N7C7 305 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 ASB9Q96DX5 294 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 TMA16Q96EY4 203 aaKnown RBP17.37■□□□□ 0.37
CLDN11-201ENST00000064724 UNC93B1Q9H1C4 597 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 ALG9Q9H6U8 611 aa17.37■□□□□ 0.37
CLDN11-201ENST00000064724 RIMKLBQ9ULI2 386 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms