RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SLC12A2P55011 1212 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 LINGO4Q6UY18 593 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 ZCCHC23Q6ZST2 131 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 GPATCH11Q8N954 259 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 DDI1Q8WTU0 396 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 USP13Q92995 863 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 CDKN2AIPNLQ96HQ2 116 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 EXOC2Q96KP1 924 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 LMLNQ96KR4 655 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 FAM96AQ9H5X1 160 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 TASP1Q9H6P5 420 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 ZNF395Q9H8N7 513 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 ECT2Q9H8V3 914 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 OXSMQ9NWU1 459 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 HACD3Q9P035 362 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 MARCH4Q9P2E8 410 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 SPO11Q9Y5K1 396 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 ANKRD66B4E2M5 251 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 SCAMP3O14828 347 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 CD3EAPO15446 510 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 MOSPD3O75425 235 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 GOT2P00505 430 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 SBK3P0C264 359 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 ALOX15P16050 662 aaPredicted RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 MAPK8P45983 427 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 NUMBP49757 651 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 ABCE1P61221 599 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RPL26P61254 145 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RHOAP61586 193 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 TRAF2Q12933 501 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 ITGA9Q13797 1035 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 TYSND1Q2T9J0 566 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 ZNF789Q5FWF6 425 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RBM20Q5T481 1227 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 ASRGL1Q7L266 308 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 CLNKQ7Z7G1 428 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 OR4L1Q8NH43 312 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 PIWIL2Q8TC59 973 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 KCTD4Q8WVF5 259 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RMDN1Q96DB5 314 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 SORT1Q99523 831 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 TUBB6Q9BUF5 446 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 WWP1Q9H0M0 922 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RASSF4Q9H2L5 321 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 INTS10Q9NVR2 710 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 HEY2Q9UBP5 337 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 ZMYM5Q9UJ78 669 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RPL26L1Q9UNX3 145 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 RUVBL2Q9Y230 463 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 VWA7Q9Y334 891 aa14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 MTCL1Q9Y4B5 1905 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-201ENST00000023939 C2orf81A6NN90 581 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 ITM2AO43736 263 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 HNRNPCL1O60812 293 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 CYBBP04839 570 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 PDHA1P08559 390 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 GJA1P17302 382 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 SAT1P21673 171 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 HSF5Q4G112 596 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 GPR158Q5T848 1215 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 HECTD2Q5U5R9 776 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 LRRC8EQ6NSJ5 796 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 FAM45BPQ6NSW5 357 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 AFTPHQ6ULP2 937 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 SDCCAG8Q86SQ7 713 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 MTDHQ86UE4 582 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 WDR75Q8IWA0 830 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 APCDD1Q8J025 514 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 FSTL5Q8N475 847 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 LPCAT1Q8NF37 534 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 OR13C4Q8NGS5 318 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 FAM45AQ8TCE6 357 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 SH3RF2Q8TEC5 729 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 PPP4R1Q8TF05 950 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 UBXN10Q96LJ8 280 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 TCF12Q99081 682 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 MRPL57Q9BQC6 102 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 POPDC3Q9HBV1 291 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 IGSF5Q9NSI5 407 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 CATSPERZQ9NTU4 200 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 ZFP69BQ9UJL9 534 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 PCDHGC4Q9Y5F7 938 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 H0YHG0 523 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 TCF3P15923 654 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 LPOP22079 712 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 AVPR1AP37288 418 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 SUOXP51687 545 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 LMAN2Q12907 356 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 DLG1Q12959 904 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 CAMK1Q14012 370 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 CTC1Q2NKJ3 1217 aa14.35□□□□□ -0.11
RTFDC1-201ENST00000023939 PLEKHG6Q3KR16 790 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms