RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Nipal4Q8BZF2 406 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Endod1Q8C522 501 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pnma3Q8JZW8 466 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 FgbQ8K0E8 481 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zcchc18Q8VD24 393 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1361Q8VFH0 317 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1155Q8VFR3 314 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmem168Q91VX9 697 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PccbQ99MN9 541 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Otub2Q9CQX0 234 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Abcb8Q9CXJ4 717 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Actl11Q9D5V1 1207 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Igdcc4Q9EQS9 1252 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Trpc7Q9WVC5 862 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Foxo3Q9WVH4 672 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Stat2Q9WVL2 923 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 MetP16056 1379 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Myo5bP21271 1818 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr68E9PYY2 315 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr69E9Q7C5 316 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 A430033K04RikE9Q8G5 680 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Avpr2O88721 371 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Coro1aO89053 461 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gsta1P13745 223 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CnpP16330 420 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AcrP23578 436 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AmhP27106 555 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Serpinc1P32261 465 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 BtkP35991 659 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc16a3P57787 470 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pdcd1Q02242 288 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gbp8Q2V6D6 525 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nlrc3Q5DU56 1064 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CcnjlQ5SRT8 387 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 RbfaQ6P3B9 350 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Polr2mQ6P6I6 366 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gsta1Q6P8Q0 223 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 GnsQ8BFR4 544 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lrrc39Q8BGI7 337 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cyp2d12Q8BVD2 504 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nhlrc2Q8BZW8 725 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ccdc63Q8CDV6 558 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rbmx2Q8R0F5 326 aaKnown RBP9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Art3Q8R2G4 371 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Evi2bQ8VD58 444 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr449Q8VGW8 311 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Itfg2Q91WI7 443 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PnpoQ91XF0 261 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmem63aQ91YT8 804 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Asb8Q91ZT9 288 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lrp8Q924X6 996 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Actr3Q99JY9 418 aaKnown RBP9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Thg1lQ9CY52 298 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nsfl1cQ9CZ44 370 aaKnown RBP9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Elovl7Q9D2Y9 281 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Bola1Q9D8S9 137 aaKnown RBP9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Foxp4Q9DBY0 795 aaKnown RBP9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cxcl11Q9JHH5 100 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rnf14Q9JI90 485 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Abcb9Q9JJ59 762 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ccr10Q9JL21 362 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Magel2Q9QZ04 1284 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Sucla2Q9Z2I9 463 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 ScaperF8VQ70 1398 aaKnown RBP9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Col4a1P02463 1669 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Acnat1A2AKK5 416 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Prr5lA2AVJ5 370 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dnaaf5B9EJR8 853 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ccdc78D3Z5T1 437 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm20390E9PZF0 267 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Psmc3ipO35047 217 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 E2f3O35261 457 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Aldh1a7O35945 501 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 JchainP01592 159 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PfklP12382 780 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Grin1P35438 938 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rhox4fQ2MDF8 205 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rhox4cQ2MDG1 205 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Kcnk9Q3LS21 402 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Clul1Q3ZRW6 464 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nxf3Q4ZGD9 553 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Phactr4Q501J7 694 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Eri2Q5BKS4 688 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Q6GQV0 436 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc39a4Q78IQ7 660 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 ItpkcQ7TS72 678 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pgm2Q7TSV4 620 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AftphQ80WT5 931 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Galnt12Q8BGT9 576 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tbc1d10cQ8C9V1 444 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mtmr3Q8K296 1196 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr1102Q8VES2 324 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr401Q8VFX6 315 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdha1Q91Y21 948 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 St13Q99L47 371 aaKnown RBP9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cthrc1Q9D1D6 245 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zdhhc21Q9D270 265 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rhox4aQ9D3I8 205 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tktl2Q9D4D4 627 aa9.12□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Baiap2l1Q9DBJ3 514 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms