RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Cnr2P47936 347 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Prss55Q14BX2 321 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Krt26Q3TRJ4 462 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Ccdc160Q3UYG1 323 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Cxcl17Q5UW37 119 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Spon2Q8BMS2 330 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Thop1Q8C1A5 687 aaKnown RBP23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Rps6kl1Q8R2S1 544 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Camkk1Q8VBY2 505 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Dnajc3Q91YW3 504 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Subh2bvQ9D9Z7 123 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Ropn1Q9ESG2 212 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Cyp3a41aQ9JMA7 504 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 PygmQ9WUB3 842 aaKnown RBP23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Mzf1S4R1L6 814 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm29554A0A087WNW4 188 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 A0A286YCD0 109 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Slc27a2O35488 620 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Adrb1P34971 466 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 FerP70451 823 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gucy2fQ5SDA5 1108 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Adam29Q811Q4 763 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Znf750Q8BH05 703 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Wdr60Q8C761 999 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Ccdc63Q8CDV6 558 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Alg9Q8VDI9 611 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 DcxrQ91X52 244 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Rsrc1Q9DBU6 334 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Sema4fQ9Z123 777 aa23.01■■□□□ 1.27
Upf3a-201ENSMUST00000043767 C1qbpO35658 278 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Htr7P32304 448 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Ripply1Q2WG77 201 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 1810049J17RikQ3V2G9 153 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 G2e3Q5RJY2 716 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Foxd4Q60688 444 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 BadQ61337 204 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 MslnQ61468 625 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Arl13bQ640N2 427 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Psd2Q6P1I6 770 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Olfr667Q7TRP4 326 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Susd6Q8BGE4 302 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tasp1Q8R1G1 420 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Olfr1019Q8VGS3 310 aa23■■□□□ 1.27
Upf3a-201ENSMUST00000043767 4933424G06RikA0A140LIP3 267 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm12248A0A1W2P8B8 313 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Icam1P13597 537 aaKnown RBP22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 SpnP15702 395 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 ErgP81270 486 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 AurkaP97477 395 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Dact3Q0PHV7 610 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Kcnc2Q14B80 642 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Slc17a7Q3TXX4 560 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 CcnhQ61458 323 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm5414Q6IFZ8 552 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Cpa1Q7TPZ8 419 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Insig1Q8BGI3 259 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm6377Q8BHV4 303 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gpr61Q8C010 449 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tcaf2Q921K8 919 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tcf7l2Q924A0 459 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Smarcd2Q99JR8 531 aaKnown RBP22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 LiasQ99M04 373 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Q9D5Y0 588 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tm9sf1Q9DBU0 606 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Atp6v1g2Q9WTT4 118 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Trpm6Q8CIR4 2028 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Ttll11A4Q9F4 727 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Sh2d4bA6X942 431 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 UtyP79457 1212 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Fbxw18Q3TSA9 469 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 DhpsQ3TXU5 369 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Taar7aQ5QD12 358 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 ItpkcQ7TS72 678 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Slc39a13Q8BZH0 361 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tmem81Q9D5K1 259 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 IgtpQ9DCE9 423 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Cyb561d2Q9WUE3 222 aa22.99■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm1141B9EJU1 475 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 MntO08789 591 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Pdha1P35486 390 aaKnown RBP22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 B230104I21RikQ3USW4 141 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Sdf4Q61112 361 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Itga7Q61738 1179 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gdpd5Q640M6 607 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Fam120bQ6RI63 786 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 B130006D01RikQ8BRH6 153 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Vps37bQ8R0J7 285 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Dhcr24Q8VCH6 516 aaKnown RBP22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Stx18Q8VDS8 334 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Hkdc1Q91W97 915 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Lrrc17Q9CXD9 443 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tspan11Q9D1D1 253 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 PdiltQ9DAN1 588 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 CtsrQ9JIA9 334 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 RhoaQ9QUI0 193 aa22.98■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Zfp612A0A1D5RMC2 672 aa22.97■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Man1b1A2AJ15 658 aa22.97■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm3259D3YUK0 475 aa22.97■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Gm7275E9Q1B3 247 aa22.97■■□□□ 1.27
Upf3a-201ENSMUST00000043767 Tnk2O54967 1055 aa22.97■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms