RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 CAVIN4Q5BKX8 364 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 ANGEL2Q5VTE6 544 aaKnown RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 AGAP7PQ5VUJ5 663 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 ANKRD26P1Q6NSI1 321 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 C16orf89Q6UX73 402 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 FRMD7Q6ZUT3 714 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 HAUS6Q7Z4H7 955 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 SETD3Q86TU7 594 aaPredicted RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 SLC47A2Q86VL8 602 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 SLC26A11Q86WA9 606 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 RHPN2Q8IUC4 686 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 ARHGEF19Q8IW93 802 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 COLGALT2Q8IYK4 626 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 LILRA2Q8N149 483 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 SIX6OS1Q8N1H7 587 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 CPSF7Q8N684 471 aaKnown RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 SLC15A4Q8N697 577 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 GLIS1Q8NBF1 620 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 ZNF384Q8TF68 577 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 TFB1MQ8WVM0 346 aaKnown RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 NACC2Q96BF6 587 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 ZNF512Q96ME7 567 aaPredicted RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 COG8Q96MW5 612 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 FAM118BQ9BPY3 351 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 BOCQ9BWV1 1114 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 ANKRD60Q9BZ19 345 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 CPVLQ9H3G5 476 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 XAB2Q9HCS7 855 aaKnown RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 DNAJC28Q9NX36 388 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.96□□□□□ -1.45
CASC19-260ENST00000641828 ANKMY1Q9P2S6 941 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 SEL1LQ9UBV2 794 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 CPQQ9Y646 472 aa5.96□□□□□ -1.45
CASC19-260ENST00000641828 CYP3A7-CYP3A51PA0A087WV96 503 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 LOC100653049A0A140TA62 436 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 A0A1B0GTW7 788 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 C7orf72A4D263 438 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TRIM64A6NGJ6 449 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ZNF561-AS1K7EIQ3 104 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 SLC22A1O15245 554 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 NOL3O60936 208 aaKnown RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 GCATO75600 419 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 KRT34O76011 436 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TPPPO94811 219 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 STARD3NLO95772 234 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ETS1P14921 441 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TCEA1P23193 301 aaKnown RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 CYP3A7P24462 503 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CRHR1P34998 444 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 GNL1P36915 607 aaPredicted RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 BCL6P41182 706 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 GTF2A2P52657 109 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 PEX3P56589 373 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 PSMC6P62333 389 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 RPL11P62913 178 aaKnown RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 MRPS22P82650 360 aaKnown RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 CHRNDQ07001 517 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CD300CQ08708 224 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 GALNT2Q10471 571 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 GRSF1Q12849 480 aaKnown RBP eCLIP5.96□□□□□ -1.46
CASC19-260ENST00000641828 ODF1Q14990 250 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 MGAT5BQ3V5L5 792 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 FNBP1LQ5T0N5 605 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 STXBP5Q5T5C0 1151 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 KRT39Q6A163 491 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 PDPK2PQ6A1A2 396 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ZNF280DQ6N043 979 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CDHR3Q6ZTQ4 885 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TXNRD3Q86VQ6 643 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CADM3Q8N126 398 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 BEND7Q8N7W2 519 aaPredicted RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 NAT16Q8N8M0 369 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 NAT8LQ8N9F0 302 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 PDZD8Q8NEN9 1154 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TNIP2Q8NFZ5 429 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 LILRB4Q8NHJ6 448 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CD99L2Q8TCZ2 262 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TMEM174Q8WUU8 243 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 SHC3Q92529 594 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ATP2A3Q93084 1043 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 NKD2Q969F2 451 aaPredicted RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 COA7Q96BR5 231 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 MED30Q96HR3 178 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ZNF347Q96SE7 839 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 PKP2Q99959 881 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TUBA1CQ9BQE3 449 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 MECRQ9BV79 373 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 APOL6Q9BWW8 343 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 C20orf27Q9GZN8 174 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 TMEM117Q9H0C3 514 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 GLT8D2Q9H1C3 349 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 PNPLA8Q9NP80 782 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 AGPAT3Q9NRZ7 376 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CLDND1Q9NY35 253 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CRNNQ9UBG3 495 aaPredicted RBP5.96□□□□□ -1.46
CASC19-260ENST00000641828 DAPK2Q9UIK4 370 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ZBTB21Q9ULJ3 1066 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 CDC14AQ9UNH5 594 aa5.96□□□□□ -1.46
CASC19-260ENST00000641828 ITM2BQ9Y287 266 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms