RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 TUBB6Q9BUF5 446 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CADM1Q9BY67 442 aaKnown RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 IGSF5Q9NSI5 407 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 XPR1Q9UBH6 696 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 SPO11Q9Y5K1 396 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 KIAA1671Q9BY89 1806 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 A0A087X1B8 175 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CBX4O00257 560 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 INSIG1O15503 277 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CCDC22O60826 627 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 HSPA4LO95757 839 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 NDST3O95803 873 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CHRNGP07510 517 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 SERPINA6P08185 405 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 ESRRAP11474 423 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CALB2P22676 271 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 GRIA4P48058 902 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 PPP3CCP48454 512 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 SCNN1BP51168 640 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CLCN5P51795 746 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 EPHB3P54753 998 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 PRAMEP78395 509 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 ARF5P84085 180 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 UBAP2LQ14157 1087 aaKnown RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 LIPMQ5VYY2 423 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 TXNDC8Q6A555 127 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 GALNT7Q86SF2 657 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 BBS5Q8N3I7 341 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 FAM13CQ8NE31 585 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 BRSK1Q8TDC3 778 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 SMIM14Q96QK8 99 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 BTBD10Q9BSF8 475 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 CDH19Q9H159 772 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 MRPL17Q9NRX2 175 aaKnown RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 MID2Q9UJV3 735 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 MTF2Q9Y483 593 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-219ENST00000639811 PTPRSQ13332 1948 aa9.88□□□□□ -0.83
NECAP1-219ENST00000639811 OBSL1O75147 1896 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 CCDC162PA2VCL2 907 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 PRR5-ARHGAP8B1AHC4 643 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 GFRA2O00451 464 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 NRG2O14511 850 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 SNAP91O60641 907 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 TBL1XO60907 577 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 H2AFYO75367 372 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 ZMPSTE24O75844 475 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 OLFM2O95897 454 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 GOT2P00505 430 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 PRLP01236 227 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 ATP5BP06576 529 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 ENO1P06733 434 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 MZF1P28698 734 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 CPA2P48052 419 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 CDKN2DP55273 166 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 ARHGAP8P85298 464 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 SEMA3AQ14563 771 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 RFTN1Q14699 578 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 SLC14A2Q15849 920 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 HECTD2Q5U5R9 776 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 LINGO4Q6UY18 593 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 HERC6Q8IVU3 1022 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 FBXO27Q8NI29 283 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 MAPK15Q8TD08 544 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 YME1L1Q96TA2 773 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 MUC3BQ9H195 1237 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 STN1Q9H668 368 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 C11orf49Q9H6J7 331 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 TAS2R1Q9NYW7 299 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 RPP40O75818 363 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 WISP3O95389 354 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 C1RP00736 705 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 PDHA1P08559 390 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 LINC00271P0C7V0 271 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 PRSS56P0CW18 603 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 MPSTP25325 297 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 GJA8P48165 433 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 NAGLUP54802 743 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 CSHL1Q14406 222 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 TSNAXIP1Q2TAA8 658 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 TMEM207Q6UWW9 146 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 Q6ZNB5 142 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 LSMEM2Q8N112 164 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 CARNMT1Q8N4J0 409 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 TDRD5Q8NAT2 981 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 WFDC5Q8TCV5 224 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 AGR3Q8TD06 166 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 AGAP11Q8TF27 550 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 ANKRD49Q8WVL7 239 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 SGF29Q96ES7 293 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 DDX50Q9BQ39 737 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 TDRD1Q9BXT4 1180 aaKnown RBP9.87□□□□□ -0.83
NECAP1-219ENST00000639811 DRC3Q9H069 523 aa9.87□□□□□ -0.83
NECAP1-219ENST00000639811 MRPL46Q9H2W6 279 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms