RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	CLIP4	Q8N3C7	705 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	COLGALT1	Q8NBJ5	622 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	HTR3C	Q8WXA8	447 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	HDAC2	Q92769	488 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MED30	Q96HR3	178 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	VPS39	Q96JC1	886 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MCMBP	Q9BTE3	642 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	OR2B2	Q9GZK3	357 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	SOX17	Q9H6I2	414 aa	Predicted RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MARCH7	Q9H992	704 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MRM3	Q9HC36	420 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	NEK6	Q9HC98	313 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PCDH12	Q9NPG4	1184 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PIH1D1	Q9NWS0	290 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	GABBR1	Q9UBS5	961 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	AP4E1	Q9UPM8	1137 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	TMX2	Q9Y320	296 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PCDHA10	Q9Y5I2	948 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MYO18A	Q92614	2054 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	ANK1	P16157	1881 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708		A6NL46	340 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	GOLGA8CP	A6NN73	597 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708		M0QYV0	167 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	B4GAT1	O43505	415 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	DLX3	O60479	287 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	GABARAP	O95166	117 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	ITIH1	P19827	911 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	CASP3	P42574	277 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	CHRNE	Q04844	493 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	DGUOK	Q16854	277 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PITRM1	Q5JRX3	1037 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	BSPRY	Q5W0U4	402 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	SCYL2	Q6P3W7	929 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	TAS2R42	Q7RTR8	314 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PAPD5	Q8NDF8	572 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	PHF10	Q8WUB8	498 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	OSCP1	Q8WVF1	389 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	4e-20	■■■■■ 90.2
STRADA-231	ENST00000638708	AKT1S1	Q96B36	256 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	MFSD3	Q96ES6	412 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	UBXN10	Q96LJ8	280 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	IL12RB2	Q99665	862 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	GPR22	Q99680	433 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	HOPX	Q9BPY8	73 aa	Predicted RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	ING2	Q9H160	280 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	XYLT2	Q9H1B5	865 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	TRIT1	Q9H3H1	467 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	NOL6	Q9H6R4	1146 aa	Known RBP	11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	GTSE1	Q9NYZ3	720 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	TLK1	Q9UKI8	766 aa		11.16	□□□□□ -0.62
STRADA-231	ENST00000638708	COL2A1	P02458	1487 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708		F5H423	210 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	SNPH	O15079	494 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	HOXC11	O43248	304 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	RFPL2	O75678	378 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	CAPN15	O75808	1086 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	GRK3	P35626	688 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	NAMPT	P43490	491 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	NKX2-5	P52952	324 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	GJA9	P57773	515 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	CLC	Q05315	142 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	PTPN11	Q06124	597 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	SELPLG	Q14242	412 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	EMC2	Q15006	297 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	SIGIRR	Q6IA17	410 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	FAM183BP	Q6ZVS7	135 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	PIGZ	Q86VD9	579 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	TBC1D21	Q8IYX1	336 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	NLGN1	Q8N2Q7	840 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	MASTL	Q96GX5	879 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	MUS81	Q96NY9	551 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	AGAP2	Q99490	1192 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	SLC39A3	Q9BRY0	314 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	HPS4	Q9NQG7	708 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	CRNN	Q9UBG3	495 aa	Predicted RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	FBXO40	Q9UH90	709 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	EIF3L	Q9Y262	564 aa	Known RBP	11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	PCDHGA3	Q9Y5H0	932 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	TLL2	Q9Y6L7	1015 aa		11.15	□□□□□ -0.62
STRADA-231	ENST00000638708	ZFC3H1	O60293	1989 aa	Known RBP	11.15	□□□□□ -0.63
STRADA-231	ENST00000638708	MAGEB16	A2A368	324 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	KLRG2	A4D1S0	409 aa	Predicted RBP	11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	TCP10L2	B9ZVM9	353 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708		H0Y858	1186 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708		K7ERI5	159 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	NFIB	O00712	420 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	RIMBP2	O15034	1052 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	ARPC2	O15144	300 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	IDH3B	O43837	385 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	GPC4	O75487	556 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	LDLR	P01130	860 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	ICAM1	P05362	532 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	GSN	P06396	782 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	EIF2D	P41214	584 aa	Known RBP	11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	GPD2	P43304	727 aa		11.14	□□□□□ -0.63
STRADA-231	ENST00000638708	ABCG1	P45844	678 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms