RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 CNOT6Q9ULM6 557 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 CPSF4LA6NMK7 179 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 USP12O75317 370 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 TOP3AQ13472 1001 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 MAPK14Q16539 360 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 ALG1LQ6GMV1 187 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 BTBD10Q9BSF8 475 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 MCMBPQ9BTE3 642 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 GYPCP04921 128 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 FSHRP23945 695 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 RIN1Q13671 783 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 VANGL1Q8TAA9 524 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 CITED4Q96RK1 184 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 MED31Q9Y3C7 131 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 PDHXO00330 501 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 SLC25A14O95258 325 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 CAPZA1P52907 286 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 TCP10LQ8TDR4 215 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 LMLNQ96KR4 655 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 NRKQ7Z2Y5 1582 aa17.6■□□□□ 0.41
CACNA1A-225ENST00000636389 PROCP04070 461 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 ELFN1P0C7U0 828 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 ERVK-9P63128 1117 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 CYP4F8P98187 520 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 LSM12Q3MHD2 195 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 TMEM63BQ5T3F8 832 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 ERVK-11Q9UQG0 969 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 IFT52Q9Y366 437 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 NT5EP21589 574 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 RPL3P39023 403 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 VLDLRP98155 873 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 HCAR2Q8TDS4 363 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 TNFAIP8L1Q8WVP5 186 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 SAMHD1Q9Y3Z3 626 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 PDE2AO00408 941 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 FFAR2O15552 330 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 SOX10P56693 466 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 ZNF227Q86WZ6 799 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 BRSK1Q8TDC3 778 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 LENG9Q96B70 501 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 PANX1Q96RD7 426 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 CCDC86Q9H6F5 360 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 MYH15Q9Y2K3 1946 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 UBOX5O94941 541 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 ELK3P41970 407 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 KLHL35Q6PF15 583 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 TBATAQ96M53 351 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 FAM86C2PA6NEL3 165 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 METTL18O95568 372 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 CTPS1P17812 591 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 RPS12P25398 132 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 C16orf46Q6P387 395 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 C11orf24Q96F05 449 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 MRPS33Q9Y291 106 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 CBFA2T3O75081 653 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 CCNDBP1O95273 360 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 LYPLAL1Q5VWZ2 237 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 ZCCHC12Q6PEW1 402 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 LRRC69Q6ZNQ3 347 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 PCDH20Q8N6Y1 951 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 SLC2A14Q8TDB8 520 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 OXNAD1Q96HP4 312 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 NDNQ99608 321 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 RNF19AQ9NV58 838 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
CACNA1A-225ENST00000636389 A0A087WXM4 84 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 HCN1O60741 890 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 ENTPD3O75355 529 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 KCNJ5P48544 419 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 DNAJA4Q8WW22 397 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 ZNF518BQ9C0D4 1074 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 NKIRAS2Q9NYR9 191 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 TRHDEQ9UKU6 1024 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 GP5P40197 560 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 RPL38P63173 70 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 CADM2Q8N3J6 435 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 DNAAF1Q8NEP3 725 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 HDCP19113 662 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 IST1P53990 364 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 ZNF155Q12901 538 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 ABCA11PQ4W5N1 156 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 SCIMPQ6UWF3 145 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 C12orf50Q8NA57 414 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 GAL3ST1Q99999 423 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.41
CACNA1A-225ENST00000636389 CD101Q93033 1021 aa17.58■□□□□ 0.4
CACNA1A-225ENST00000636389 RGSL1A5PLK6 1076 aa17.58■□□□□ 0.4
CACNA1A-225ENST00000636389 AXLP30530 894 aa17.58■□□□□ 0.4
CACNA1A-225ENST00000636389 GRK5P34947 590 aa17.58■□□□□ 0.4
CACNA1A-225ENST00000636389 UBE2R2Q712K3 238 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms