RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 POM121BA6NF01 834 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 TK2O00142 265 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 MMP20O60882 483 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 C1QL1O75973 258 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 TM7SF2O76062 418 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 PROSCO94903 275 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 TMEM253P0C7T8 217 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 RABIFP47224 123 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 RENBPP51606 427 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 ADKP55263 362 aaKnown RBP18.54■□□□□ 0.56
CLN6-214ENST00000636314 ZNF235Q14590 738 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 LBRQ14739 615 aaKnown RBP18.54■□□□□ 0.56
CLN6-214ENST00000636314 RTP5Q14D33 572 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 BRAT1Q6PJG6 821 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 KANSL1Q7Z3B3 1105 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 DCP2Q8IU60 420 aaKnown RBP18.54■□□□□ 0.56
CLN6-214ENST00000636314 CAMK1DQ8IU85 385 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 KLF6Q99612 283 aaPredicted RBP18.54■□□□□ 0.56
CLN6-214ENST00000636314 GPR27Q9NS67 375 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 LRRK1Q38SD2 2015 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 PTPRQQ9UMZ3 2332 aa18.54■□□□□ 0.56
CLN6-214ENST00000636314 BUB1BO60566 1050 aaPredicted RBP18.53■□□□□ 0.56
CLN6-214ENST00000636314 ITIH2P19823 946 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 AP1S1P61966 158 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 BCL2L1Q07817 233 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 UGP2Q16851 508 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 ERAP2Q6P179 960 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 BBS5Q8N3I7 341 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 IFT43Q96FT9 208 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 CCDC42Q96M95 316 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 PSKH2Q96QS6 385 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 CHP1Q99653 195 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 PCDH12Q9NPG4 1184 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 SPTLC3Q9NUV7 552 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 DNAJC28Q9NX36 388 aa18.53■□□□□ 0.56
CLN6-214ENST00000636314 TMEM110-MUSTN1A8MSY1 372 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 MUSKO15146 869 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 BRINP1O60477 761 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 CD48P09326 243 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 CKMT2P17540 419 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
CLN6-214ENST00000636314 SCNN1BP51168 640 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 NSUN2Q08J23 767 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLN6-214ENST00000636314 SLC10A7Q0GE19 358 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 MMRN1Q13201 1228 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 ILKQ13418 452 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 PDE1CQ14123 709 aaPredicted RBP18.52■□□□□ 0.56
CLN6-214ENST00000636314 TMEM52BQ4KMG9 183 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 HS1BP3Q53T59 392 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 PARGQ86W56 976 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 CPNE8Q86YQ8 564 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 SNIP1Q8TAD8 396 aaKnown RBP18.52■□□□□ 0.56
CLN6-214ENST00000636314 NSMCE1Q8WV22 266 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 NHEJ1Q9H9Q4 299 aaPredicted RBP18.52■□□□□ 0.56
CLN6-214ENST00000636314 CLCA2Q9UQC9 943 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 ATP8A1Q9Y2Q0 1164 aa18.52■□□□□ 0.56
CLN6-214ENST00000636314 SPTY2D1-AS1A0A0U1RR47 76 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 AKR1B15C9JRZ8 316 aaPredicted RBP18.51■□□□□ 0.55
CLN6-214ENST00000636314 H3BM21 787 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 MAFKO60675 156 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 PIAS2O75928 621 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 KRT7P08729 469 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 DGKAP23743 735 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 MAN1A1P33908 653 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 ACTN2P35609 894 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 IGFALSP35858 605 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 MMP12P39900 470 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 PFN3P60673 137 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 CCDC173Q0VFZ6 552 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 DPYSL3Q14195 570 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 ZNF542PQ5EBM4 170 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 ZFYVE27Q5T4F4 411 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 SARM1Q6SZW1 724 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 ZSWIM9Q86XI8 627 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 FAM71BQ8TC56 605 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 FGF11Q92914 225 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 ZNF670Q9BS34 389 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
CLN6-214ENST00000636314 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.5■□□□□ 0.55
CLN6-214ENST00000636314 RIOK3O14730 519 aaKnown RBP18.5■□□□□ 0.55
CLN6-214ENST00000636314 FFAR2O15552 330 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 MFSD11O43934 449 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 PRKCGP05129 697 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 C6P13671 934 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 IL4RP24394 825 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 ARSEP51690 589 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 THOP1P52888 689 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 TAS2R40P59535 323 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 HNRNPKP61978 463 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLN6-214ENST00000636314 INSM1Q01101 510 aaPredicted RBP18.5■□□□□ 0.55
CLN6-214ENST00000636314 FZD2Q14332 565 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 MESDQ14696 234 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 PDK2Q15119 407 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 ATP13A4Q4VNC1 1196 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 KDM7AQ6ZMT4 941 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 GPR155Q7Z3F1 870 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 MAP7D3Q8IWC1 876 aa18.5■□□□□ 0.55
CLN6-214ENST00000636314 TP53I13Q8NBR0 393 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms