RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
PNKP-225ENST00000636214 ASXL3Q9C0F0 2248 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 LAMA5O15230 3695 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 TPP1O14773 563 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 SERPING1P05155 500 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 GIMD1P0DJR0 217 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 CTSEP14091 401 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 SERPINB6P35237 376 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 SSR1P43307 286 aaKnown RBP18.06■□□□□ 0.48
PNKP-225ENST00000636214 LIG3P49916 1009 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 PEX5P50542 639 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 SCNN1BP51168 640 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 AP1S1P61966 158 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 RTP5Q14D33 572 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 ELOCQ15369 112 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 TPRG1LQ5T0D9 272 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 ESRP1Q6NXG1 681 aaKnown RBP18.06■□□□□ 0.48
PNKP-225ENST00000636214 PDZD3Q86UT5 571 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 RBFAQ8N0V3 343 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
PNKP-225ENST00000636214 CPLX3Q8WVH0 158 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 TBATAQ96M53 351 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 ZNF599Q96NL3 588 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 MBNL1Q9NR56 388 aaKnown RBP18.06■□□□□ 0.48
PNKP-225ENST00000636214 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.06■□□□□ 0.48
PNKP-225ENST00000636214 IP6K2Q9UHH9 426 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 KLF15Q9UIH9 416 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 ATRXP46100 2492 aa18.06■□□□□ 0.48
PNKP-225ENST00000636214 LRRK1Q38SD2 2015 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 BUB1BO60566 1050 aaPredicted RBP18.05■□□□□ 0.48
PNKP-225ENST00000636214 PCCBP05166 539 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ALPIP09923 528 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ELFN1P0C7U0 828 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 MYF5P13349 255 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ACTN2P35609 894 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 HSPA9P38646 679 aaKnown RBP18.05■□□□□ 0.48
PNKP-225ENST00000636214 MMP12P39900 470 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ADKP55263 362 aaKnown RBP18.05■□□□□ 0.48
PNKP-225ENST00000636214 ZBED6P86452 979 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 NSUN2Q08J23 767 aaKnown RBP eCLIP18.05■□□□□ 0.48
PNKP-225ENST00000636214 C1orf61Q13536 156 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 DPYSQ14117 519 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 KRT81Q14533 505 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 LBRQ14739 615 aaKnown RBP18.05■□□□□ 0.48
PNKP-225ENST00000636214 DPYSL2Q16555 572 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 AFMIDQ63HM1 303 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 EFL1Q7Z2Z2 1120 aaKnown RBP18.05■□□□□ 0.48
PNKP-225ENST00000636214 HID1Q8IV36 788 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ARHGAP12Q8IWW6 846 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ATPAF2Q8N5M1 289 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 NPWQ8N729 165 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 TPCN2Q8NHX9 752 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 NAT6Q93015 286 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 VOPP1Q96AW1 172 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 CAAP1Q9H8G2 361 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 KLQ9UEF7 1012 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 ANAPC7Q9UJX3 599 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 LUC7L2Q9Y383 392 aaKnown RBP18.05■□□□□ 0.48
PNKP-225ENST00000636214 CELSR3Q9NYQ7 3312 aa18.05■□□□□ 0.48
PNKP-225ENST00000636214 A0A087WV48 116 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.04■□□□□ 0.48
PNKP-225ENST00000636214 LMO7DNF2Z398 122 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 BRINP1O60477 761 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 RASGRP1O95267 797 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 PRKCGP05129 697 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 RGRP47804 291 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 NFATC4Q14934 902 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 HADHQ16836 314 aaKnown RBP18.04■□□□□ 0.48
PNKP-225ENST00000636214 WSCD2Q2TBF2 565 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 ENPP7Q6UWV6 458 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 ARHGAP36Q6ZRI8 547 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 CYP4V2Q6ZWL3 525 aaPredicted RBP18.04■□□□□ 0.48
PNKP-225ENST00000636214 RD3Q7Z3Z2 195 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 LRRC61Q9BV99 259 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 NUP85Q9BW27 656 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 THAP2Q9H0W7 228 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 TCEAL2Q9H3H9 227 aaPredicted RBP18.04■□□□□ 0.48
PNKP-225ENST00000636214 SYNDIG1Q9H7V2 258 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 ITPR1Q14643 2758 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 RP1P56715 2156 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 NBEAQ8NFP9 2946 aa18.04■□□□□ 0.48
PNKP-225ENST00000636214 A0A1W2PQ67 120 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 CFAP69A5D8W1 941 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 MYO1FO00160 1098 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 CACNB4O00305 520 aaPredicted RBP18.03■□□□□ 0.48
PNKP-225ENST00000636214 MUSKO15146 869 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 CSO75390 466 aaKnown RBP18.03■□□□□ 0.48
PNKP-225ENST00000636214 TSHRP16473 764 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 AMPD1P23109 780 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 HK3P52790 923 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 MTM1Q13496 603 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 INPP5AQ14642 412 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 C6orf132Q5T0Z8 1188 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 HGSNATQ68CP4 663 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 GUSBP11Q6P575 273 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 POLNQ7Z5Q5 900 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 GKN2Q86XP6 184 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 LSMEM2Q8N112 164 aa18.03■□□□□ 0.48
PNKP-225ENST00000636214 PDCD6IPQ8WUM4 868 aaKnown RBP18.03■□□□□ 0.48
PNKP-225ENST00000636214 TEKT4Q8WW24 435 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms