RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CNTN6Q9UQ52 1028 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 COQ6Q9Y2Z9 468 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 KCNMB2Q9Y691 235 aa18.31■□□□□ 0.52
CLN6-212ENST00000636020 B4E171 279 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 MKRN2OSH3BPM6 223 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 CSTF2P33240 577 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLN6-212ENST00000636020 TSPAN7P41732 249 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 FMO5P49326 533 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 CXCR3P49682 368 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 DCAF12Q5T6F0 453 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 FOXR2Q6PJQ5 311 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 C17orf82Q86X59 251 aaPredicted RBP18.3■□□□□ 0.52
CLN6-212ENST00000636020 FAM114A1Q8IWE2 563 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 CCDC13Q8IYE1 715 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 OR2AP1Q8NGE2 309 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 C1orf74Q96LT6 269 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 KCTD3Q9Y597 815 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 DOCK4Q8N1I0 1966 aa18.3■□□□□ 0.52
CLN6-212ENST00000636020 CXorf51AA0A1B0GTR3 108 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 A0A1B0GVL5 298 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 TTLL8A6PVC2 850 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 PMM2O15305 246 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 CLDN1O95832 211 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 GSRP00390 522 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 PFKFB1P16118 471 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 TCN2P20062 427 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 MAZP56270 477 aaKnown RBP18.29■□□□□ 0.52
CLN6-212ENST00000636020 GCNT1Q02742 428 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 GNA12Q03113 381 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 ABHD18Q0P651 414 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
CLN6-212ENST00000636020 TMEM52BQ4KMG9 183 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 BRMS1LQ5PSV4 323 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 ANKS6Q68DC2 871 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 C16orf46Q6P387 395 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
CLN6-212ENST00000636020 GDPD4Q6W3E5 623 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 TIPARPQ7Z3E1 657 aaKnown RBP18.29■□□□□ 0.52
CLN6-212ENST00000636020 ARHGEF19Q8IW93 802 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 SRRM1Q8IYB3 904 aaKnown RBP18.29■□□□□ 0.52
CLN6-212ENST00000636020 OR4D9Q8NGE8 314 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 CCL4L1Q8NHW4 92 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 CPT1CQ8TCG5 803 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 ZNF606Q8WXB4 792 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 STARD8Q92502 1023 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 TMEM168Q9H0V1 697 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 FGF22Q9HCT0 170 aa18.29■□□□□ 0.52
CLN6-212ENST00000636020 ARMCX3Q9UH62 379 aaPredicted RBP18.29■□□□□ 0.52
CLN6-212ENST00000636020 SHANK1Q9Y566 2161 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 TMEM202A6NGA9 273 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 RHPN2P1A8MT19 583 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 MED7O43513 233 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 LETM1O95202 739 aaPredicted RBP18.28■□□□□ 0.52
CLN6-212ENST00000636020 RAB15P59190 212 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 SNRPD1P62314 119 aaKnown RBP18.28■□□□□ 0.52
CLN6-212ENST00000636020 SMYD4Q8IYR2 804 aaPredicted RBP18.28■□□□□ 0.52
CLN6-212ENST00000636020 WDTC1Q8N5D0 677 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 OR56A4Q8NGH8 313 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 KIAA1524Q8TCG1 905 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 ARHGEF2Q92974 986 aaKnown RBP18.28■□□□□ 0.52
CLN6-212ENST00000636020 RTP4Q96DX8 246 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 KREMEN1Q96MU8 473 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 CPXM1Q96SM3 734 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 ZNF768Q9H5H4 540 aaKnown RBP18.28■□□□□ 0.52
CLN6-212ENST00000636020 MRPL40Q9NQ50 206 aaKnown RBP18.28■□□□□ 0.52
CLN6-212ENST00000636020 DKK3Q9UBP4 350 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 ITPR3Q14573 2671 aa18.28■□□□□ 0.52
CLN6-212ENST00000636020 ZW10O43264 779 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 THRAP10827 490 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 TFE3P19532 575 aaPredicted RBP18.27■□□□□ 0.52
CLN6-212ENST00000636020 ACVRL1P37023 503 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 GPR3P46089 330 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 MTM1Q13496 603 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 SQSTM1Q13501 440 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 POLD3Q15054 466 aaPredicted RBP18.27■□□□□ 0.52
CLN6-212ENST00000636020 NRSN1Q8IZ57 195 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 BMPERQ8N8U9 685 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 TEFMQ96QE5 360 aaKnown RBP18.27■□□□□ 0.52
CLN6-212ENST00000636020 NPY6RQ99463 290 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 SPATS2LQ9NUQ6 558 aaKnown RBP18.27■□□□□ 0.52
CLN6-212ENST00000636020 RCOR1Q9UKL0 485 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 HPSEQ9Y251 543 aa18.27■□□□□ 0.52
CLN6-212ENST00000636020 ZFHX3Q15911 3703 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 ADGRG4Q8IZF6 3080 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 SRGAP2O75044 1071 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 DAB1O75553 588 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 KRT5P13647 590 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 CMA1P23946 247 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 MPSTP25325 297 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 COPB1P53618 953 aaKnown RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 KIAA1024LP59773 190 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 AGERQ15109 404 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 ATXN7L2Q5T6C5 722 aaPredicted RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 ACBD5Q5T8D3 534 aaPredicted RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
CLN6-212ENST00000636020 C1QL3Q5VWW1 255 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 NKAIN2Q5VXU1 208 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 OLFML1Q6UWY5 402 aa18.26■□□□□ 0.51
CLN6-212ENST00000636020 C11orf57Q6ZUT1 292 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms