RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-229	ENST00000636010	PDK1	Q15118	436 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	MEI1	Q5TIA1	1274 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NSMCE1	Q8WV22	266 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	P3H4	Q92791	437 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SERAC1	Q96JX3	654 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	ZNF641	Q96N77	438 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	AGAP3	Q96P47	875 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	GTPBP2	Q9BX10	602 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	POLR1E	Q9GZS1	481 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	BRD8	Q9H0E9	1235 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	MIF4GD	A9UHW6	222 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	RIOK3	O14730	519 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	FZD6	O60353	706 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	MMP20	O60882	483 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PTMA	P06454	111 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	GNS	P15586	552 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CD68	P34810	354 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	KLF1	Q13351	362 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	GRM3	Q14832	879 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	KIF19	Q2TAC6	998 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PRAMEF14	Q5SWL7	426 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NAPEPLD	Q6IQ20	393 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	GCNT7	Q6ZNI0	430 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PRPF39	Q86UA1	669 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	BBS5	Q8N3I7	341 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TMEM145	Q8NBT3	493 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CEP76	Q8TAP6	659 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	RAB7B	Q96AH8	199 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	KLF6	Q99612	283 aa	Predicted RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NUSAP1	Q9BXS6	441 aa	Known RBP	11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	AASDHPPT	Q9NRN7	309 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SUSD2	Q9UGT4	822 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PYCARD	Q9ULZ3	195 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CHKB	Q9Y259	395 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PCDHB9	Q9Y5E1	797 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	RAI2	Q9Y5P3	530 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SNX11	Q9Y5W9	270 aa		11.63	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SPTBN2	O15020	2390 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	POM121B	A6NF01	834 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	GOLGA8CP	A6NN73	597 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	C4orf47	A7E2U8	309 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NEMP1	O14524	444 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	ARHGAP33	O14559	1287 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TSPAN6	O43657	245 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SOCS5	O75159	536 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PGLS	O95336	258 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	MT-CYB	P00156	380 aa	Predicted RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CP	P00450	1065 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PRL	P01236	227 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	ALPI	P09923	528 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CTPS1	P17812	591 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	LHCGR	P22888	699 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	RBL1	P28749	1068 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CD38	P28907	300 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CD86	P42081	329 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	DPP6	P42658	865 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	GRIA4	P48058	902 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NR2C2	P49116	596 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	AFF3	P51826	1226 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	RACK1	P63244	317 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SKOR1	P84550	965 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TMEM52B	Q4KMG9	183 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SETMAR	Q53H47	684 aa	Predicted RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TPRG1L	Q5T0D9	272 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	STPG1	Q5TH74	334 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	KIAA1161	Q6NSJ0	714 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NEK5	Q6P3R8	708 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	BRAT1	Q6PJG6	821 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	ADAT2	Q7Z6V5	191 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TSPAN33	Q86UF1	283 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SPATS2	Q86XZ4	545 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	MINDY1	Q8N5J2	469 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	UBL4B	Q8N7F7	174 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SPATA22	Q8NHS9	363 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NETO1	Q8TDF5	533 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TFB1M	Q8WVM0	346 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PIH1D2	Q8WWB5	315 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	BMF	Q96LC9	184 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CNTNAP3B	Q96NU0	1288 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	3e-9	■■■■■ 48.2
SPTAN1-229	ENST00000636010	C1QTNF2	Q9BXJ5	285 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TLR10	Q9BXR5	811 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TDRD1	Q9BXT4	1180 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	SLC17A9	Q9BYT1	436 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CNTNAP3	Q9BZ76	1288 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	TRMT1	Q9NXH9	659 aa	Known RBP	11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	B4GALT6	Q9UBX8	382 aa		11.62	□□□□□ -0.55
SPTAN1-229	ENST00000636010	PTPRB	P23467	1997 aa		11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	C6	P13671	934 aa		11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	NFKB1	P19838	968 aa		11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	HNRNPA2B1	P22626	353 aa	Known RBP	11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	XPA	P23025	273 aa	Predicted RBP	11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	IGFALS	P35858	605 aa		11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	CTSK	P43235	329 aa		11.61	□□□□□ -0.55
SPTAN1-229	ENST00000636010	LIG3	P49916	1009 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms