RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 H7C0C1 242 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 KLKB1P03952 638 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 CD48P09326 243 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ATP5OP48047 213 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ZNF143P52747 638 aaPredicted RBP15.64■□□□□ 0.09
CLN8-209ENST00000635970 ARHGAP8P85298 464 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ITGA9Q13797 1035 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 OTUD1Q5VV17 481 aaPredicted RBP15.64■□□□□ 0.09
CLN8-209ENST00000635970 BEND5Q7L4P6 421 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.64■□□□□ 0.09
CLN8-209ENST00000635970 CMTM5Q96DZ9 223 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 TRIM62Q9BVG3 475 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 XAB2Q9HCS7 855 aaKnown RBP15.64■□□□□ 0.09
CLN8-209ENST00000635970 SLC2A4RGQ9NR83 387 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 HEBP1Q9NRV9 189 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 THG1LQ9NWX6 298 aaKnown RBP15.64■□□□□ 0.09
CLN8-209ENST00000635970 COX16Q9P0S2 106 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 CA14Q9ULX7 337 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 TECTAO75443 2155 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ZCCHC18P0CG32 403 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 PRDX6P30041 224 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 SCNN1AP37088 669 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 MAGEA3P43357 314 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 COPAP53621 1224 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ALDH18A1P54886 795 aaKnown RBP15.64■□□□□ 0.09
CLN8-209ENST00000635970 COG7P83436 770 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 EML3Q32P44 896 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 PGM2L1Q6PCE3 622 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 UBALD2Q8IYN6 164 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 NDUFAF2Q8N183 169 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 RNF217Q8TC41 542 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ACTRT2Q8TDY3 377 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 HSPH1Q92598 858 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 IRF7Q92985 503 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 ATP2A3Q93084 1043 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 RNF157Q96PX1 679 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 CNPY3Q9BT09 278 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 MECRQ9BV79 373 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 SLC13A1Q9BZW2 595 aa15.64■□□□□ 0.09
CLN8-209ENST00000635970 E2F8A0AVK6 867 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 IGLV3-25P01717 112 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 GRK2P25098 689 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 CORO1AP31146 461 aaKnown RBP15.63■□□□□ 0.09
CLN8-209ENST00000635970 MATKP42679 507 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 SOX9P48436 509 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 CDH6P55285 790 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 LSAMPQ13449 338 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 BOLA3Q53S33 107 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 CAND1Q86VP6 1230 aaKnown RBP15.63■□□□□ 0.09
CLN8-209ENST00000635970 CCDC33Q8N5R6 958 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 FBXO27Q8NI29 283 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 PPP1R14CQ8TAE6 165 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 EDAQ92838 391 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 PCMTD2Q9NV79 361 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 ETNK2Q9NVF9 386 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLN8-209ENST00000635970 PCSK1NQ9UHG2 260 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 PPM1HQ9ULR3 514 aa15.63■□□□□ 0.09
CLN8-209ENST00000635970 CASQ2O14958 399 aaPredicted RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 IRAK2O43187 625 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 PENKP01210 267 aaPredicted RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 TPSB2P20231 275 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 NOS2P35228 1153 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 SULT1E1P49888 294 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 NAB1Q13506 487 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 MAP7Q14244 749 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 TRIP4Q15650 581 aaPredicted RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 TPSAB1Q15661 275 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 INSCQ1MX18 579 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 Q6ZNB5 142 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 RFX8Q6ZV50 586 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 HTR3DQ70Z44 454 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 DENND1CQ8IV53 801 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 PLD4Q96BZ4 506 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 SERPINB11Q96P15 392 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 EBNA1BP2Q99848 306 aaKnown RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 EPHX3Q9H6B9 360 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 DDIT4Q9NX09 232 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 DNAJC28Q9NX36 388 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 DCDC2Q9UHG0 476 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 LSM7Q9UK45 103 aaKnown RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 FBXL21Q9UKT6 434 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 KIAA1549LQ6ZVL6 1849 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 KRBA1A5PL33 1030 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 ARHGAP42A6NI28 874 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 CXorf49A8MYA2 514 aaPredicted RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 KCNN4O15554 427 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 GLRA3O75311 464 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 IGLV3-27P01718 113 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 L1CAMP32004 1257 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 ATXN1P54253 815 aaKnown RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 TBX4P57082 545 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 NME3Q13232 169 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 LRRC23Q53EV4 343 aaPredicted RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 RAB6CQ53S08 254 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 CFAP157Q5JU67 520 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 RABGAP1LQ5R372 815 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 TMEM126BQ8IUX1 230 aa15.62■□□□□ 0.09
CLN8-209ENST00000635970 TAB3Q8N5C8 712 aaPredicted RBP15.62■□□□□ 0.09
CLN8-209ENST00000635970 PPP4R1Q8TF05 950 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms