RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SV2AQ7L0J3 742 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ARL8AQ96BM9 186 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF419Q96HQ0 510 aaPredicted RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 BBC3Q96PG8 261 aaPredicted RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 C6orf106Q9H6K1 298 aaPredicted RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 TCF7L1Q9HCS4 588 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ELOVL2Q9NXB9 296 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 WSB2Q9NYS7 404 aaPredicted RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CWC15Q9P013 229 aaKnown RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PCOLCE2Q9UKZ9 415 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 FRMD4BQ9Y2L6 1034 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ATMQ13315 3056 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PLK4O00444 970 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 BUB1BO60566 1050 aaPredicted RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 HSF2BPO75031 334 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 VNN1O95497 513 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CER1O95813 267 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 KLKB1P03952 638 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 BMP4P12644 408 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 JUPP14923 745 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CD19P15391 556 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 HOXB4P17483 251 aaPredicted RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 DNA2P51530 1060 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 MFAP3P55082 362 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SNRPFP62306 86 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CUL1Q13616 776 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 TRADDQ15628 312 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 BBS9Q3SYG4 887 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 INTS8Q75QN2 995 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 LIMS2Q7Z4I7 341 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ANKS1BQ7Z6G8 1248 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ATL2Q8NHH9 583 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 NUDT8Q8WV74 236 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 BTN2A2Q8WVV5 523 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ADAMTS14Q8WXS8 1223 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 P2RY11Q96G91 374 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 NAF1Q96HR8 494 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 AASDHPPTQ9NRN7 309 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 MARCH2Q9P0N8 246 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SNX11Q9Y5W9 270 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 A0A0A0MRY4 1105 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SNRPBP14678 240 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ABCB4P21439 1286 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 PRKCHP24723 683 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CHKAP35790 457 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 NOP2P46087 812 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 PPP3CAQ08209 521 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SGSM1Q2NKQ1 1148 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 PEX26Q7Z412 305 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SRLQ86TD4 932 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 VWA5B2Q8N398 1253 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA6L1Q8N7Z2 621 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 TAS1R2Q8TE23 839 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 OVCA2Q8WZ82 227 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ARHGEF26Q96DR7 871 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CEP295NLQ96MC4 621 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CDC6Q99741 560 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ABCB8Q9NUT2 735 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 TAS2R14Q9NYV8 317 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 PTPRDP23468 1912 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 MYO16Q9Y6X6 1858 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SART1O43290 800 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 MSI1O43347 362 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CEP104O60308 925 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 MTA2O94776 668 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 PRKD3O94806 890 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 DNTTP04053 509 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 CCDC172P0C7W6 258 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ITPKBP27987 946 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 IRAK1P51617 712 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 VAMP7P51809 220 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 AFF3P51826 1226 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 GABREP78334 506 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 COG7P83436 770 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 DNAJC3Q13217 504 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SLC14A1Q13336 389 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SUZ12Q15022 739 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 C11orf63Q6NUN7 778 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 LRIG3Q6UXM1 1119 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 DAAM2Q86T65 1068 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SPATS2Q86XZ4 545 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 ARHGEF19Q8IW93 802 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 KLHL7Q8IXQ5 586 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 TMEM145Q8NBT3 493 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 SLC35G2Q8TBE7 412 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 RNF139Q8WU17 664 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 FANCD2OSQ96PS1 177 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 GABRG3Q99928 467 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 BTBD1Q9H0C5 482 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 NEUROG2Q9H2A3 272 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 LCMT1Q9UIC8 334 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 AGO1Q9UL18 857 aaKnown RBP4.95□□□□□ -1.62
LINC00550-201ENST00000629293 NFS1Q9Y697 457 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 BOD1L1Q8NFC6 3051 aa4.95□□□□□ -1.62
LINC00550-201ENST00000629293 H0Y8X5 98 aa4.94□□□□□ -1.62
LINC00550-201ENST00000629293 FOXN3O00409 490 aaPredicted RBP4.94□□□□□ -1.62
LINC00550-201ENST00000629293 EIF3HO15372 352 aaKnown RBP eCLIP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms