RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 VAV3Q9UKW4 847 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 DERAQ9Y315 318 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 BIRC5O15392 142 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 FAM151BQ6UXP7 276 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 ZNF662Q6ZS27 426 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 FBXW8Q8N3Y1 598 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 AADATQ8N5Z0 425 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 ZNF671Q8TAW3 534 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 PTCD3Q96EY7 689 aaKnown RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 LINGO1Q96FE5 620 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 PCDH18Q9HCL0 1135 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 LRRC14BA6NHZ5 514 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 STX11O75558 287 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 LYPLA2O95372 231 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 NUDT17P0C025 328 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 PPM1AP35813 382 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 RPL3P39023 403 aaKnown RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 GABRB2P47870 512 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 AIF1P55008 147 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 BHLHB9Q6PI77 547 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 C1orf50Q9BV19 199 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 KPNA4O00629 521 aaPredicted RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 OR10H2O60403 315 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 LINC00032P0C843 101 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 OR1D2P34982 312 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 CPSF6Q16630 551 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 FAM46CQ5VWP2 391 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 RP9Q8TA86 221 aaKnown RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 S100A13Q99584 98 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 SPATA5L1Q9BVQ7 753 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 AASDHPPTQ9NRN7 309 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 CORO2BQ9UQ03 480 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 OR10H1Q9Y4A9 318 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 AZIN1O14977 448 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ACSL4O60488 711 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 FKTNO75072 461 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 FSBPO95073 299 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 NR2F1P10589 423 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 HTR1BP28222 390 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 POTEHQ6S545 545 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ABHD15Q6UXT9 468 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 CD101Q93033 1021 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 KLRG1Q96E93 195 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 REXO5Q96IC2 774 aaKnown RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 COPS8Q99627 209 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TRIM8Q9BZR9 551 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 SMIM35A0A1B0GVV1 85 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TRIM38O00635 465 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ALOX15BO15296 676 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 SNUPNO95149 360 aaKnown RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 MYBL2P10244 700 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 EPHA3P29320 983 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TM4SF1P30408 202 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TUSC3Q13454 348 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ZIK1Q3SY52 487 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 PACS1Q6VY07 963 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 B3GNT5Q9BYG0 378 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 GRIP2Q9C0E4 1043 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 LHX5Q9H2C1 402 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 RNPEPL1Q9HAU8 725 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 VPS4AQ9UN37 437 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ISM1B1AKI9 464 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 SLC25A14O95258 325 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 GABRR2P28476 465 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 HNRNPH3P31942 346 aaKnown RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TTC23Q5W5X9 447 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 RASAL3Q86YV0 1011 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ZNF398Q8TD17 642 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 FERD3LQ96RJ6 166 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 ZMYND8Q9ULU4 1186 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 VWA7Q9Y334 891 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 URADA6NGE7 173 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 H0Y858 1186 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 CXCL14O95715 111 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 IL6P05231 212 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 MTAPQ13126 283 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 PRKG2Q13237 762 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TOP3AQ13472 1001 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-209ENST00000627620 AP5B1Q2VPB7 878 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 TIMM50Q3ZCQ8 353 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
SCN8A-209ENST00000627620 SPESP1Q6UW49 350 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms