RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PTAR1Q7Z6K3 402 aaPredicted RBP22.18■■□□□ 1.14
PNKP-220ENST00000627232 BLOC1S5Q8TDH9 187 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 SLC7A6OSQ96CW6 309 aaPredicted RBP22.18■■□□□ 1.14
PNKP-220ENST00000627232 TMA16Q96EY4 203 aaKnown RBP22.18■■□□□ 1.14
PNKP-220ENST00000627232 NSL1Q96IY1 281 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 SCYL1Q96KG9 808 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 GPR78Q96P69 363 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 LRRC3Q9BY71 257 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 DNAJC28Q9NX36 388 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 MARCOQ9UEW3 520 aaPredicted RBP22.18■■□□□ 1.14
PNKP-220ENST00000627232 CORO1CQ9ULV4 474 aaPredicted RBP22.18■■□□□ 1.14
PNKP-220ENST00000627232 KCTD3Q9Y597 815 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 CPQQ9Y646 472 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 C2orf71A6NGG8 1288 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 ANKRD36A6QL64 1941 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 ZMPSTE24O75844 475 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 CBX6O95503 412 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 S1PR4O95977 384 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 SBK3P0C264 359 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 HOXB8P17481 243 aaPredicted RBP22.17■■□□□ 1.14
PNKP-220ENST00000627232 PFKLP17858 780 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 PSMA3P25788 255 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 GABRR2P28476 465 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 PTPN4P29074 926 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 SCNN1BP51168 640 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 ASPHQ12797 758 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 RALGPS1Q5JS13 557 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 LIPMQ5VYY2 423 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 TMC8Q8IU68 726 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 PARP9Q8IXQ6 854 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 FSTL5Q8N475 847 aaPredicted RBP22.17■■□□□ 1.14
PNKP-220ENST00000627232 CARNMT1Q8N4J0 409 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 KIF2BQ8N4N8 673 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 SCG3Q8WXD2 468 aaKnown RBP22.17■■□□□ 1.14
PNKP-220ENST00000627232 CLP1Q92989 425 aaKnown RBP22.17■■□□□ 1.14
PNKP-220ENST00000627232 PTCD3Q96EY7 689 aaKnown RBP22.17■■□□□ 1.14
PNKP-220ENST00000627232 TDRD1Q9BXT4 1180 aaKnown RBP22.17■■□□□ 1.14
PNKP-220ENST00000627232 SORCS3Q9UPU3 1222 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 BRCA2P51587 3418 aa22.17■■□□□ 1.14
PNKP-220ENST00000627232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 AURKAO14965 403 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 CXCL14O95715 111 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 GLP2RO95838 553 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 ADH1AP07327 375 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 KRT16P08779 473 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 SPATA31D3P0C874 917 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 OGNP20774 298 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 TBCCQ15814 346 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 RBM20Q5T481 1227 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 SPATA31D4Q6ZUB0 917 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 CPXM2Q8N436 756 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 TTC8Q8TAM2 541 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 NXNL1Q96CM4 212 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 DNAJC1Q96KC8 554 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 TBATAQ96M53 351 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 MRPL57Q9BQC6 102 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 GATA5Q9BWX5 397 aaPredicted RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 ARL8BQ9NVJ2 186 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 NLE1Q9NVX2 485 aaPredicted RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 CPSF2Q9P2I0 782 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 OR51B4Q9Y5P0 310 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 ARL5AQ9Y689 179 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 ZBBXA8MT70 800 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 TK2O00142 265 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 TMCC1O94876 653 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 HSPA4LO95757 839 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 CD160O95971 181 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 FGBP02675 491 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 SERPINA6P08185 405 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 CALB2P22676 271 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 CDC25CP30307 473 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 ARRB2P32121 409 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 CA8P35219 290 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 NUMBP49757 651 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 DLG1Q12959 904 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 PPIGQ13427 754 aaKnown RBP eCLIP22.16■■□□□ 1.145e-7■■■■□ 22.6
PNKP-220ENST00000627232 TAF1AQ15573 450 aaPredicted RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 ZNF789Q5FWF6 425 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 HECTD2Q5U5R9 776 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 MRNIPQ6NTE8 343 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 HTR3DQ70Z44 454 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 GAREM2Q75VX8 874 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 ALYREFQ86V81 257 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 ELMOD1Q8N336 334 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 NSMCE3Q96MG7 304 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 FEM1AQ9BSK4 669 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 NMUR2Q9GZQ4 415 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 MRPL46Q9H2W6 279 aaKnown RBP22.16■■□□□ 1.14
PNKP-220ENST00000627232 INSL6Q9Y581 213 aa22.16■■□□□ 1.14
PNKP-220ENST00000627232 HELZP42694 1942 aaKnown RBP22.15■■□□□ 1.14
PNKP-220ENST00000627232 CD3EAPO15446 510 aaKnown RBP22.15■■□□□ 1.14
PNKP-220ENST00000627232 GOT2P00505 430 aaKnown RBP22.15■■□□□ 1.14
PNKP-220ENST00000627232 PRLP01236 227 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 MYL4P12829 197 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 SLC26A3P40879 764 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 HK2P52789 917 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 ZNF460Q14592 562 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 FAM45BPQ6NSW5 357 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 NAPRTQ6XQN6 538 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 ATG14Q6ZNE5 492 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms