RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SDK2Q58EX2 2172 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 CXorf51AA0A1B0GTR3 108 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 INSIG1O15503 277 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 PIGNO95427 931 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 NTRK1P04629 796 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 RHOQP17081 205 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 SCNN1AP37088 669 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 GABRB2P47870 512 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 ELP6Q0PNE2 266 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 UBAP2LQ14157 1087 aaKnown RBP14.81□□□□□ -0.04
PNKP-218ENST00000625299 C16orf72Q14CZ0 275 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 AMZ1Q400G9 498 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 TMEM52BQ4KMG9 183 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 BORAQ6PGQ7 559 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 TMPRSS9Q7Z410 1059 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 NLRP14Q86W24 1093 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 ZNF564Q8TBZ8 553 aaPredicted RBP14.81□□□□□ -0.04
PNKP-218ENST00000625299 RBM15Q96T37 977 aaKnown RBP eCLIP14.81□□□□□ -0.04
PNKP-218ENST00000625299 TTYH3Q9C0H2 523 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 EPN3Q9H201 632 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 DPEP2Q9H4A9 486 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 RDH14Q9HBH5 336 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 METTL5Q9NRN9 209 aaKnown RBP14.81□□□□□ -0.04
PNKP-218ENST00000625299 TMEM248Q9NWD8 314 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 AKAP7Q9P0M2 348 aaPredicted RBP14.81□□□□□ -0.04
PNKP-218ENST00000625299 MOSPD1Q9UJG1 213 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 APPL1Q9UKG1 709 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 RELNP78509 3460 aa14.81□□□□□ -0.04
PNKP-218ENST00000625299 LRRK2Q5S007 2527 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 FAM72CH0Y354 149 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 STMND1H3BQB6 276 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 KDELR3O43731 214 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 PRKCGP05129 697 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 CD82P27701 267 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 ATP1A2P50993 1020 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 POLE2P56282 527 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 RAPGEF1Q13905 1077 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 C15orf59Q2T9L4 293 aaPredicted RBP14.8□□□□□ -0.04
PNKP-218ENST00000625299 C14orf28Q4W4Y0 310 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 CFAP58Q5T655 872 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 FAM72AQ5TYM5 149 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 MANEALQ5VSG8 457 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 FAM72DQ6L9T8 149 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 BNIPLQ7Z465 357 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 FAM72BQ86X60 149 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 SLITRK4Q8IW52 837 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 MSANTD4Q8NCY6 345 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 OR1E3Q8WZA6 343 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 TBC1D31Q96DN5 1066 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 HMCESQ96FZ2 354 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 MAGEB5Q9BZ81 275 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 SUDS3Q9H7L9 328 aaPredicted RBP14.8□□□□□ -0.04
PNKP-218ENST00000625299 SIX2Q9NPC8 291 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 PCDH12Q9NPG4 1184 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 MRPL40Q9NQ50 206 aaKnown RBP14.8□□□□□ -0.04
PNKP-218ENST00000625299 DKK3Q9UBP4 350 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 TMEM59LQ9UK28 342 aa14.8□□□□□ -0.04
PNKP-218ENST00000625299 NBASA2RRP1 2371 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 ZSCAN5CA6NGD5 496 aaPredicted RBP14.79□□□□□ -0.04
PNKP-218ENST00000625299 LRIG2O94898 1065 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 CCL4P13236 92 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 CYP11B1P15538 503 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 CDH5P33151 784 aaPredicted RBP14.79□□□□□ -0.04
PNKP-218ENST00000625299 ADRA1BP35368 520 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 MTIF2P46199 727 aaKnown RBP14.79□□□□□ -0.04
PNKP-218ENST00000625299 LIG3P49916 1009 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 BPIFB4P59827 614 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 KCNAB2Q13303 367 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 IGFBP7Q16270 282 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 ERAP2Q6P179 960 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 PHLDB2Q86SQ0 1253 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 PIM3Q86V86 326 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 IRF2BP1Q8IU81 584 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 IL22RA1Q8N6P7 574 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 PLA2G15Q8NCC3 412 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 RCBTB1Q8NDN9 531 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 CPA5Q8WXQ8 436 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 TMEM168Q9H0V1 697 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 ADNPQ9H2P0 1102 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 FGF22Q9HCT0 170 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 DAAM1Q9Y4D1 1078 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 DGKBQ9Y6T7 804 aa14.79□□□□□ -0.04
PNKP-218ENST00000625299 ARHGEF17Q96PE2 2063 aaPredicted RBP14.78□□□□□ -0.04
PNKP-218ENST00000625299 GTPBP10A4D1E9 387 aaKnown RBP14.78□□□□□ -0.04
PNKP-218ENST00000625299 TMEM202A6NGA9 273 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 CACNB4O00305 520 aaPredicted RBP14.78□□□□□ -0.04
PNKP-218ENST00000625299 GP1BBP13224 206 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 PNLIPP16233 465 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 ALDH4A1P30038 563 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 OR1D5P58170 312 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 MTM1Q13496 603 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 HLTFQ14527 1009 aaKnown RBP eCLIP14.78□□□□□ -0.04
PNKP-218ENST00000625299 UGP2Q16851 508 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 NAA35Q5VZE5 725 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 FAM71AQ8IYT1 594 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 OR56A4Q8NGH8 313 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 CCL4L1Q8NHW4 92 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 PMEPA1Q969W9 287 aa14.78□□□□□ -0.04
PNKP-218ENST00000625299 SLC12A9Q9BXP2 914 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms