RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RHOXF2Q9BQY4 288 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 LRRC1Q9BTT6 524 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 LRRC19Q9H756 370 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 ETNK2Q9NVF9 386 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 RCOR3Q9P2K3 495 aaPredicted RBP12.81□□□□□ -0.36
PNKP-217ENST00000625216 HECAQ9UBI9 543 aaPredicted RBP12.81□□□□□ -0.36
PNKP-217ENST00000625216 FCF1Q9Y324 198 aaKnown RBP12.81□□□□□ -0.36
PNKP-217ENST00000625216 MFHAS1Q9Y4C4 1052 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 WASF2Q9Y6W5 498 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 SHROOM3Q8TF72 1996 aa12.81□□□□□ -0.36
PNKP-217ENST00000625216 H3BRJ5 948 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 EEF2KO00418 725 aaKnown RBP12.8□□□□□ -0.36
PNKP-217ENST00000625216 WNT9AO14904 365 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 AP1G1O43747 822 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 CREB3O43889 395 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
PNKP-217ENST00000625216 PROS1P07225 676 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 FTH1P19P0C7X4 201 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 AMPD1P23109 780 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 ITGB7P26010 798 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 MAT2AP31153 395 aaKnown RBP12.8□□□□□ -0.36
PNKP-217ENST00000625216 ARL4AP40617 200 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 RXRGP48443 463 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 ZNF135P52742 658 aaPredicted RBP12.8□□□□□ -0.36
PNKP-217ENST00000625216 DPYSQ14117 519 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 NCBP2-AS2Q69YL0 99 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 FBXL19Q6PCT2 694 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 UMODL1-AS1Q8N2C9 162 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 OR2AP1Q8NGE2 309 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 GRIN3AQ8TCU5 1115 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 RAB7BQ96AH8 199 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 FEM1CQ96JP0 617 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 OSBPL1AQ9BXW6 950 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 MSRB2Q9Y3D2 182 aa12.8□□□□□ -0.36
PNKP-217ENST00000625216 A0A1W2PQU0 124 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TMEM8BA6NDV4 472 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 APOC4-APOC2K7ER74 178 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 APOL1O14791 398 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TNFSF14O43557 240 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 LIASO43766 372 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 HYAL3O43820 417 aaPredicted RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 PCDH8O95206 1070 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TOP3BO95985 862 aaKnown RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 APOC2P02655 101 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 ITGAVP06756 1048 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 AKT2P31751 481 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 COILP38432 576 aaPredicted RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 PTGIRP43119 386 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 KCNJ1P48048 391 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 FNTAP49354 379 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 NDST2P52849 883 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TPI1P60174 286 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 RPS21P63220 83 aaKnown RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 SLC7A5Q01650 507 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 RAD51Q06609 339 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 SERINC3Q13530 473 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 SNX1Q13596 522 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TFDP2Q14188 446 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 NOMO1Q15155 1222 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 CCNG2Q16589 344 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 ST3GAL2Q16842 350 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 ZNF284Q2VY69 593 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 KIAA1161Q6NSJ0 714 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 RFX8Q6ZV50 586 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 ZNF354CQ86Y25 554 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 RYBPQ8N488 228 aaPredicted RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 CHCHD4Q8N4Q1 142 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 SLC35B2Q8TB61 432 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 ACTL9Q8TC94 416 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 KLHDC7BQ96G42 594 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TRIM51Q9BSJ1 452 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 TM6SF2Q9BZW4 377 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 NOL6Q9H6R4 1146 aaKnown RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 SAE1Q9UBE0 346 aaPredicted RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 AMACRQ9UHK6 382 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 DMGDHQ9UI17 866 aaKnown RBP12.79□□□□□ -0.36
PNKP-217ENST00000625216 DNPEPQ9ULA0 475 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 ADAMTS9Q9P2N4 1935 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 CHD5Q8TDI0 1954 aa12.79□□□□□ -0.36
PNKP-217ENST00000625216 C16orf96A6NNT2 1141 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 RASA4BC9J798 803 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
PNKP-217ENST00000625216 TTI1O43156 1089 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 RASA4O43374 803 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 TSPAN6O43657 245 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 MFSD11O43934 449 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 ADRB3P13945 408 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 ERCC2P18074 760 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 SPINK2P20155 84 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 TGM2P21980 687 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
PNKP-217ENST00000625216 OASLQ15646 514 aaKnown RBP12.78□□□□□ -0.36
PNKP-217ENST00000625216 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
PNKP-217ENST00000625216 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
PNKP-217ENST00000625216 CCDC137Q6PK04 289 aaKnown RBP12.78□□□□□ -0.36
PNKP-217ENST00000625216 DCP2Q8IU60 420 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms