RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MYL2P10916 166 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 SLC1A6P48664 564 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 PLK1P53350 603 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 ARF5P84085 180 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 AGAP9Q5VTM2 703 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 AFTPHQ6ULP2 937 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 CMC1Q7Z7K0 106 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 MAB21L3Q8N8X9 362 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 OR6P1Q8NGX9 317 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 FIBINQ8TAL6 211 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 DDI1Q8WTU0 396 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 RMDN1Q96DB5 314 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 OTUB2Q96DC9 234 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 ATXN7L3BQ96GX2 97 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 C12orf65Q9H3J6 166 aaKnown RBP16.44■□□□□ 0.22
LDB3-208ENST00000623007 TASP1Q9H6P5 420 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
LDB3-208ENST00000623007 TBC1D14Q9P2M4 693 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 ZFP69BQ9UJL9 534 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 A0A0G2JND7 137 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 MUSKO15146 869 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 TMCC1O94876 653 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 RBP1P09455 135 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 FGF3P11487 239 aaPredicted RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 TCF3P15923 654 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 AVPR1AP37288 418 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 GRIA4P48058 902 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 ZBTB16Q05516 673 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 CTBP1Q13363 440 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 AARS2Q5JTZ9 985 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 ZYG11AQ6WRX3 759 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 C10orf67Q8IYJ2 551 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 BLOC1S5Q8TDH9 187 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 ADAMTS19Q8TE59 1207 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 INPP5DQ92835 1189 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 ERP27Q96DN0 273 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 ELMO2Q96JJ3 720 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 CYP2S1Q96SQ9 504 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 MECRQ9BV79 373 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 CFAP97Q9P2B7 532 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 SLC2A6Q9UGQ3 507 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 OR51B4Q9Y5P0 310 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 A0A1W2PQ67 120 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 SLCO1B7G3V0H7 640 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 TRAFD1O14545 582 aaPredicted RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 ZNF197O14709 1029 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 GSRP00390 522 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 SLC35E2BP0CK96 405 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 LPOP22079 712 aaPredicted RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 GABRB3P28472 473 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 PPARGP37231 505 aaPredicted RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 SGSHP51688 502 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 CLCN4P51793 760 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 RHOAP61586 193 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 PPM1JQ5JR12 505 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 LIPMQ5VYY2 423 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 NCEH1Q6PIU2 408 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 GLT6D1Q7Z4J2 308 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 DENND6AQ8IWF6 608 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 OR52K2Q8NGK3 314 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 OR4L1Q8NH43 312 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 PDCD6IPQ8WUM4 868 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 HDAC10Q969S8 669 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 RAB3IPQ96QF0 476 aaPredicted RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 TMEM120AQ9BXJ8 343 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 MRPL46Q9H2W6 279 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 CATSPERZQ9NTU4 200 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 MRGBPQ9NV56 204 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 GGT7Q9UJ14 662 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 APOBEC2Q9Y235 224 aaKnown RBP16.43■□□□□ 0.22
LDB3-208ENST00000623007 CHKBQ9Y259 395 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 RAI2Q9Y5P3 530 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 COMMD10Q9Y6G5 202 aa16.43■□□□□ 0.22
LDB3-208ENST00000623007 GOLGA8CPA6NN73 597 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 ANKRD66B4E2M5 251 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 GOLGA8TH3BQL2 631 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 CD3EAPO15446 510 aaKnown RBP16.42■□□□□ 0.22
LDB3-208ENST00000623007 SOCS5O75159 536 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 ABCE1P61221 599 aaKnown RBP16.42■□□□□ 0.22
LDB3-208ENST00000623007 NAA20P61599 178 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 MPP1Q00013 466 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 SULT2A1Q06520 285 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 DMC1Q14565 340 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 GPATCH11Q8N954 259 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 OR6Y1Q8NGX8 325 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 SLC22A12Q96S37 553 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 CORO1BQ9BR76 489 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 C1QTNF1Q9BXJ1 281 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 ECT2Q9H8V3 914 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 OXSMQ9NWU1 459 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 ZDHHC7Q9NXF8 308 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 VWA7Q9Y334 891 aa16.42■□□□□ 0.22
LDB3-208ENST00000623007 H7C0S8 307 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 LEFTY2O00292 366 aa16.41■□□□□ 0.22
LDB3-208ENST00000623007 SLC9A3R1O14745 358 aaPredicted RBP16.41■□□□□ 0.22
LDB3-208ENST00000623007 PENKP01210 267 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms