RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SYNDIG1Q9H7V2 258 aa16.23■□□□□ 0.19
GABRB3-215ENST00000622697 C6orf203Q9P0P8 240 aaPredicted RBP16.23■□□□□ 0.19
GABRB3-215ENST00000622697 C15orf38-AP3S2A0A0A6YYH1 394 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 HOXB8P17481 243 aaPredicted RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PIK3CGP48736 1102 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PFKPQ01813 784 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ACSM2AQ08AH3 577 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 CPSF6Q16630 551 aaKnown RBP eCLIP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ACSM2BQ68CK6 577 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ARPINQ7Z6K5 226 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ATAD1Q8NBU5 361 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 FAM156AQ8NDB6 213 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PANX3Q96QZ0 392 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF358Q9NW07 568 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 LEF1Q9UJU2 399 aaPredicted RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 DERAQ9Y315 318 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 GCATO75600 419 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 LRIG2O94898 1065 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 RPL9P32969 192 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 CENPAP49450 140 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 TYW3Q6IPR3 259 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 AAGABQ6PD74 315 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 C8orf59Q8N0T1 100 aaPredicted RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PTCD3Q96EY7 689 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PCDHB9Q9Y5E1 797 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 TNPO3Q9Y5L0 923 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 DHRS12A0PJE2 317 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 C5orf60A6NFR6 353 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PLIN3O60664 434 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 AP2A1O95782 977 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 HECTD2Q5U5R9 776 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ESRP1Q6NXG1 681 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ANKS1BQ7Z6G8 1248 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 TRIM48Q8IWZ4 208 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 CIB1Q99828 191 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 DTLQ9NZJ0 730 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 RPL26L1Q9UNX3 145 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 TIMM22Q9Y584 194 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 DPPA5A6NC42 116 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 H3BN98 237 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 UQCRBP14927 111 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 MC4RP32245 332 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 GRK4P32298 578 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 RPL5P46777 297 aaKnown RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 OGDHQ02218 1023 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 FAM151BQ6UXP7 276 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 STK40Q8N2I9 435 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 POLR1BQ9H9Y6 1135 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ITM2BQ9Y287 266 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 A0A0J9YYE9 177 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 TGDSO95455 350 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 IRF8Q02556 426 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 PCED1BQ96HM7 432 aa16.22■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF395Q9H8N7 513 aaPredicted RBP16.22■□□□□ 0.19
GABRB3-215ENST00000622697 SMIM35A0A1B0GVV1 85 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 MYBPHLA2RUH7 354 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 NPEPPSL1A6NEC2 478 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 ULK1O75385 1050 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 IFNA14P01570 189 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 SERPINA4P29622 427 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 TTPAP49638 278 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 GPR15P49685 360 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 SLC5A9Q2M3M2 681 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 C6orf52Q5T4I8 152 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 ARHGAP36Q6ZRI8 547 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 DENND6AQ8IWF6 608 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 PRPF19Q9UMS4 504 aaKnown RBP16.21■□□□□ 0.19
GABRB3-215ENST00000622697 CXorf49A8MYA2 514 aaPredicted RBP16.21■□□□□ 0.19
GABRB3-215ENST00000622697 KRT75O95678 551 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 MLYCDO95822 493 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 ANXA5P08758 320 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 GPD2P43304 727 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 CCL23P55773 120 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 GSTA3Q16772 222 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 DRICH1Q6PGQ1 229 aaPredicted RBP16.21■□□□□ 0.19
GABRB3-215ENST00000622697 PHF21AQ96BD5 680 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 ZNF180Q9UJW8 692 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 GIT1Q9Y2X7 761 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 DSC2Q02487 901 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 TCEA2Q15560 299 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 SDE2Q6IQ49 451 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 CYP4Z1Q86W10 505 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 SPPL2CQ8IUH8 684 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 KBTBD2Q8IY47 623 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 RSPH1Q8WYR4 309 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 GBA3Q9H227 469 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 FAM53CQ9NYF3 392 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 AGO1Q9UL18 857 aaKnown RBP16.21■□□□□ 0.19
GABRB3-215ENST00000622697 NRP2O60462 931 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 MT-ND1P03886 318 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 CRATP43155 626 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 IDH2P48735 452 aaKnown RBP16.21■□□□□ 0.19
GABRB3-215ENST00000622697 LILRA4P59901 499 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 ITGADQ13349 1161 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 PCBP1Q15365 356 aaKnown RBP eCLIP16.21■□□□□ 0.19
GABRB3-215ENST00000622697 DCLRE1AQ6PJP8 1040 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 NAT8LQ8N9F0 302 aa16.21■□□□□ 0.19
GABRB3-215ENST00000622697 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms