RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 CYS1Q717R9 158 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 C10orf107Q8IVU9 208 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 CCDC28AQ8IWP9 274 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 SULF1Q8IWU6 871 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 PIWIL2Q8TC59 973 aaKnown RBP12.55□□□□□ -0.4
LITAF-221ENST00000622633 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 GDAP2Q9NXN4 497 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
LITAF-221ENST00000622633 COX16Q9P0S2 106 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 TXNDC16Q9P2K2 825 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 MORF4L1Q9UBU8 362 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 KLQ9UEF7 1012 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 RNF11Q9Y3C5 154 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 TRAF6Q9Y4K3 522 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 PAPPA2Q9BXP8 1791 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 TRIP11Q15643 1979 aa12.55□□□□□ -0.4
LITAF-221ENST00000622633 H3BRB1 525 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 DYNC1LI2O43237 492 aaPredicted RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 NUAK1O60285 661 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 F7P08709 466 aaPredicted RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 ALOX5P09917 674 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 ICAM2P13598 275 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 PITX1P78337 314 aaPredicted RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 GALNT2Q10471 571 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 OLIG2Q13516 323 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 ZBTB6Q15916 424 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 MARCH8Q5T0T0 291 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 C9orf57Q5W0N0 161 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 NEK5Q6P3R8 708 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 DSG4Q86SJ6 1040 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 TICAM1Q8IUC6 712 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 DEFB106AQ8N104 65 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 TERB1Q8NA31 727 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 CCNYQ8ND76 341 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 CDKL2Q92772 493 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 P2RY11Q96G91 374 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 MROH8Q9H579 483 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 SP140LQ9H930 580 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 PCP4L1A6NKN8 68 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 H3BMQ9 156 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 CCNT2O60583 730 aaKnown RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 GLRA3O75311 464 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 TOMM70O94826 608 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 PRKCGP05129 697 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 MLNP12872 115 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 AOC1P19801 751 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 GRK2P25098 689 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 PSMB4P28070 264 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 CPOXP36551 454 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 GNL1P36915 607 aaPredicted RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 SULT1E1P49888 294 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 BCAT1P54687 386 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 GALK2Q01415 458 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 HIC1Q14526 733 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 DSC3Q14574 896 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 PCLAFQ15004 111 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 GRIK4Q16099 956 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 AARS2Q5JTZ9 985 aaKnown RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 FAM205BPQ63HN1 556 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 MAVSQ7Z434 540 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 KCTD20Q7Z5Y7 419 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 TP53INP2Q8IXH6 220 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 BEND7Q8N7W2 519 aaPredicted RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 JADE3Q92613 823 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 FAM149B1Q96BN6 582 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 COG8Q96MW5 612 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 FAM49AQ9H0Q0 323 aaPredicted RBP12.54□□□□□ -0.4
LITAF-221ENST00000622633 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 ZNF358Q9NW07 568 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 SYBUQ9NX95 663 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 TMEM216Q9P0N5 145 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 FZD10Q9ULW2 581 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 ST14Q9Y5Y6 855 aa12.54□□□□□ -0.4
LITAF-221ENST00000622633 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
LITAF-221ENST00000622633 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ZW10O43264 779 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
LITAF-221ENST00000622633 SERPINE1P05121 402 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 CAPN1P07384 714 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 PGAM1P18669 254 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 AKAP5P24588 427 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ARRB2P32121 409 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 IDH3AP50213 366 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 PRKCQQ04759 706 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 TBCCQ15814 346 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 PGS1Q32NB8 556 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 ZBED5Q49AG3 693 aa12.53□□□□□ -0.4
LITAF-221ENST00000622633 STXBP5Q5T5C0 1151 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms