RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FBXL22Q6P050 247 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 KDELC2Q7Z4H8 507 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 TMEM126BQ8IUX1 230 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 NDNQ99608 321 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 MEAF6Q9HAF1 191 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 SP110Q9HB58 689 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 COMMD8Q9NX08 183 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 NOD1Q9Y239 953 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 MRPL42Q9Y6G3 142 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 TCAF2A6NFQ2 919 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 MOXD2PA6NHM9 499 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 OR6C75A6NL08 312 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 TMEM233B4DJY2 109 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 AIM2O14862 343 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 S1PR4O95977 384 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 EPOP01588 193 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 COL6A1P12109 1028 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 KCNA5P22460 613 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PBX3P40426 434 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PSMD8P48556 350 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 MAPKAPK2P49137 400 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 MAXP61244 160 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 MTA1Q13330 715 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 CSHL1Q14406 222 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 HECTD2Q5U5R9 776 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 ALG1LQ6GMV1 187 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 BNC2Q6ZN30 1099 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 CCNYL1Q8N7R7 359 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 GPR150Q8NGU9 434 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 CEP70Q8NHQ1 597 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 RCN3Q96D15 328 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 SPATA17Q96L03 361 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 KLHL5Q96PQ7 755 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 TRMOQ9BU70 441 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 KLHL4Q9C0H6 718 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 EML4Q9HC35 981 aaKnown RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 C6orf203Q9P0P8 240 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 RIMKLBQ9ULI2 386 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 VWA7Q9Y334 891 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 NEMP2A6NFY4 417 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 TMEM88BA6NKF7 163 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 EIF4E1BA6NMX2 242 aaKnown RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 SKAP2O75563 359 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 RTN3O95197 1032 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 ZDHHC11BP0C7U3 371 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 RAG1P15918 1043 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 YWHAQP27348 245 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 OR1G1P47890 313 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 ARSDP51689 593 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 ACLYP53396 1101 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 YBEYP58557 167 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 EFEMP1Q12805 493 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PDCD2Q16342 344 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 C5orf22Q49AR2 442 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 OGFRL1Q5TC84 451 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 ZNF280DQ6N043 979 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 KLC3Q6P597 504 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 SLC22A9Q8IVM8 553 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 TTC9BQ8N6N2 239 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 SPPL2BQ8TCT7 592 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 ANKRD49Q8WVL7 239 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PABPC5Q96DU9 382 aaKnown RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 L3HYPDHQ96EM0 354 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 FEM1CQ96JP0 617 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PPP1R36Q96LQ0 422 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 CATSPER2Q96P56 530 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 PDFQ9HBH1 243 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 UTP6Q9NYH9 597 aaKnown RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 DLGAP2Q9P1A6 1054 aa9.48□□□□□ -0.89
PDPN-212ENST00000621990 UXTQ9UBK9 157 aaPredicted RBP9.48□□□□□ -0.89
PDPN-212ENST00000621990 PRAMEF11O60813 436 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 RAMP2O60895 175 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CCDC166P0CW27 439 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 HOXB8P17481 243 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 VASPP50552 380 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 SUOXP51687 545 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 THOP1P52888 689 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CDKN2DP55273 166 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CAP1Q01518 475 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 LAMB3Q13751 1172 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 POLD3Q15054 466 aaPredicted RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 TMEM207Q6UWW9 146 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 GDPD5Q8WTR4 605 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 GSTO2Q9H4Y5 243 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 RETREG1Q9H6L5 497 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 EFCAB1Q9HAE3 211 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 POPDC3Q9HBV1 291 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TLR8Q9NR97 1041 aaKnown RBP9.47□□□□□ -0.89
PDPN-212ENST00000621990 MARCH2Q9P0N8 246 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 PSMD13Q9UNM6 376 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 ANKRD36A6QL64 1941 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TBC1D4O60343 1298 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 VNN2O95498 520 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 TBX18O95935 607 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 CAPNS1P04632 268 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 LYNP07948 512 aa9.47□□□□□ -0.89
PDPN-212ENST00000621990 HNRNPLP14866 589 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDPN-212ENST00000621990 IMPDH1P20839 514 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms