RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ZNF865P0CJ78 1059 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 EDNRBP24530 442 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CORO7P57737 925 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 GPR17Q13304 367 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 HNRNPDQ14103 355 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 LRRC23Q53EV4 343 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 ADGRF1Q5T601 910 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 HFE2Q6ZVN8 426 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 TMCO2Q7Z6W1 182 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 SYT12Q8IV01 421 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CAMKK1Q8N5S9 505 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 TEX9Q8N6V9 391 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 EFCAB3Q8N7B9 438 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 C12orf76Q8N812 135 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 RTL3Q8N8U3 475 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 KLHL23Q8NBE8 558 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 LINGO1Q96FE5 620 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 VPS50Q96JG6 964 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 HEPHQ9BQS7 1158 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CAAP1Q9H8G2 361 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CD84Q9UIB8 345 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 AJAP1Q9UKB5 411 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 CDV3Q9UKY7 258 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 SLC12A4Q9UP95 1085 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 SETD1AO15047 1707 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 CLUHO75153 1309 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF839A8K0R7 811 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 IQCF5A8MTL0 148 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SHBGP04278 402 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 IFNA16P05015 189 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 IQCF3P0C7M6 154 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 DGKEP52429 567 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 POU5F1Q01860 360 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 ELP6Q0PNE2 266 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CA9Q16790 459 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 FAM182AQ5T1J6 154 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 DUPD1Q68J44 220 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 ADAMTSL2Q86TH1 951 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 OSTM1Q86WC4 334 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 GPR156Q8NFN8 814 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 BTN2A2Q8WVV5 523 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 MFSD3Q96ES6 412 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 TRMT61BQ9BVS5 477 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 CYLDQ9NQC7 956 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 TDP1Q9NUW8 608 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 IMPAD1Q9NX62 359 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 XPR1Q9UBH6 696 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 FBXW11Q9UKB1 542 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 RAB21Q9UL25 225 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 EFR3BQ9Y2G0 817 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 A0A088AWK7 358 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 GLYATL1P3A0A0U1RQE8 302 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CFHP08603 1231 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF10P21506 573 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 S100A3P33764 101 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CDK7P50613 346 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PLA2G4EQ3MJ16 856 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 TJAP1Q5JTD0 557 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 B4GALNT2Q8NHY0 566 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PLEKHO2Q8TD55 490 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 HMGB4Q8WW32 186 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZMAT2Q96NC0 199 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 CAB39LQ9H9S4 337 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SIX2Q9NPC8 291 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 GDF3Q9NR23 364 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ARMCX1Q9P291 453 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CIDEBQ9UHD4 219 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SIX4Q9UIU6 781 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 MEIS3P2A8K0S8 358 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 H3BM21 787 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ULK1O75385 1050 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ERAL1O75616 437 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 RASGRP1O95267 797 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PFKMP08237 780 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 RPA3P35244 121 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 TIE1P35590 1138 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CCR4P51679 360 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 JAM2P57087 298 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 GRM3Q14832 879 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CRYMQ14894 314 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CST9Q5W186 159 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CDCA2Q69YH5 1023 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 KYAT3Q6YP21 454 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 CPNE8Q86YQ8 564 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 RAVER1Q8IY67 606 aaKnown RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF555Q8NEP9 628 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SPPL2AQ8TCT8 520 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 SLC22A17Q8WUG5 538 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ZNF75CPQ92670 426 aaPredicted RBP9.28□□□□□ -0.92
GGA3-223ENST00000621870 IGSF21Q96ID5 467 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 FERD3LQ96RJ6 166 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 TMCC3Q9ULS5 477 aa9.28□□□□□ -0.92
GGA3-223ENST00000621870 ERVW-1Q9UQF0 538 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms