RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 COX4I1P13073 169 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 RPL9P32969 192 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 KCNJ1P48048 391 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PSEN2P49810 448 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 MTAPQ13126 283 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PDK4Q16654 411 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 NRF1Q16656 503 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 WDR59Q6PJI9 974 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 USP43Q70EL4 1123 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 C12orf40Q86WS4 652 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 FBXO25Q8TCJ0 367 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 KCTD4Q8WVF5 259 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 SMAD5Q99717 465 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 TRMOQ9BU70 441 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 RUSC1Q9BVN2 902 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 KDM6AO15550 1401 aaPredicted RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PTPRUQ92729 1446 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 FAM172BPA6NC97 362 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 DCXO43602 365 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PRKD3O94806 890 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 OR56A5P0C7T3 313 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 NFKB1P19838 968 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 AVPR1AP37288 418 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 LIN52Q52LA3 116 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 HERC6Q8IVU3 1022 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF567Q8N184 647 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PLA2G4CQ9UP65 541 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 IQGAP1P46940 1657 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PGRP06401 933 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TNNI3P19429 210 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PRDX6P30041 224 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 MCCD1P59942 119 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RPL10AP62906 217 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 FMR1Q06787 632 aaKnown RBP eCLIP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF234Q14588 700 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 LSM12Q3MHD2 195 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 MOB2Q70IA6 237 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PTF1AQ7RTS3 328 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PIWIL4Q7Z3Z4 852 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CMTR2Q8IYT2 770 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF34Q8IZ26 560 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SVOPLQ8N434 492 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 NKAPQ8N5F7 415 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF248Q8NDW4 579 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF548Q8NEK5 533 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SERAC1Q96JX3 654 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ACOX2Q99424 681 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PFDN5Q99471 154 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TBC1D10AQ9BXI6 508 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CIPCQ9C0C6 399 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RC3H2Q9HBD1 1191 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 HMGXB4Q9UGU5 601 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF214Q9UL59 606 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 MRPS7Q9Y2R9 242 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CHADO15335 359 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ULK1O75385 1050 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PMPCBO75439 489 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TLX1P31314 330 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GPD2P43304 727 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CSHL1Q14406 222 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PAMR1Q6UXH9 720 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 DPF2Q92785 391 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ATG4CQ96DT6 458 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 C11orf24Q96F05 449 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 REEP2Q9BRK0 252 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 YTHDF1Q9BYJ9 559 aaKnown RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ANKZF1Q9H8Y5 726 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM5Q9Y2B1 443 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 AOC2O75106 756 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SERPINA3P01011 423 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ENO2P09104 434 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 KLRC2P26717 231 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GRIA3P42263 894 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PDIA6Q15084 440 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 FAM76BQ5HYJ3 339 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 HHIPL2Q6UWX4 724 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 KCNK18Q7Z418 384 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PQLC1Q8N2U9 271 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TAS2R1Q9NYW7 299 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GLS2Q9UI32 602 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ITGA11Q9UKX5 1188 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SLC22A1O15245 554 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 FTH1P02794 183 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PRH1P02810 166 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SLC9A3P48764 834 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 POLD2P49005 469 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 BLMHQ13867 455 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 THAP5Q7Z6K1 395 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CCDC28AQ8IWP9 274 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GALNT15Q8N3T1 639 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 TEX19Q8NA77 164 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 ZBTB8BQ8NAP8 495 aaPredicted RBP7.2□□□□□ -1.26
COLCA1-205ENST00000620864 PIH1D2Q8WWB5 315 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 GAL3ST3Q96A11 431 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 CREB3L1Q96BA8 519 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 SIPA1Q96FS4 1042 aa7.2□□□□□ -1.26
COLCA1-205ENST00000620864 MIR1-1HGQ9H1L0 117 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms